000000000-B5WD2_l01n02_vgt2_n.352000000987f4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-B5WD2_l01n02_vgt2_n.352000000987f4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1510318
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCT	28827	1.9086708891769812	Illumina Single End PCR Primer 1 (96% over 32bp)
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCCCTATGTGTAGATCT	4049	0.26808923683621594	Illumina Single End PCR Primer 1 (96% over 32bp)
CGCATTTTTAAATGGCGTACATGCCTCTTTTCATTCGGTAAAGAGGACTT	2295	0.1519547538995099	No Hit
CGATTACTTAAGCGTCTACGAGCGTAGCCTGCATATTTATGGTTTCACTC	2116	0.14010294520756555	No Hit
CCCAATAGTGCCGTTGCAGCTTTCCTTTGTTTTGAACCCGCTCTCAGCAG	2078	0.13758691878134274	No Hit
CCTCGATCGATTAGTATCTGTCAGCTCCATGTGTCGCCACACTTCCACCT	1975	0.13076716294184404	No Hit
GCGAGGTTTCTTATAAGCTTTTTTCATTGAGCATCCCTCCTAAAATAGAG	1795	0.11884914302815698	No Hit
GTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGGG	1638	0.10845398121455216	No Hit
GCGTCTACGAGCGTAGCCTGCATATTTATGGTTTCACTCATCTTCTTGCC	1586	0.10501099768393145	No Hit
CTGCCTTCTCATATCCTATGAATTCAGATATGGATACCACTCCATTACGA	1525	0.10097211315762641	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTGGTC	4185	65.985664	52
GTGTAGA	4885	65.19959	41
TAGATCT	4595	65.12514	44
TGGTCGC	4110	64.80535	54
TGTAGAT	4880	64.69262	42
AGATCTC	4545	64.147415	45
GTCGCCG	4260	63.838028	56
ATCTCGG	4560	63.782898	47
TCTCGGT	4395	63.310577	48
GTGCCTC	4040	63.069305	31
ATGTGTA	5150	62.932037	39
TCTATGT	4065	62.509228	36
CCTCTAT	4055	62.23181	34
AGTGTGC	4860	62.150204	28
CTCTATG	4130	61.610172	35
GAGTGTG	4965	61.540787	27
GTGGTCG	4455	61.436592	53
TGTGTAG	5245	61.3918	40
CGGTGGT	4625	60.91892	51
GGTCGCC	4460	60.582962	55