000000000-B5WD2_l01n02_vgt2_b.35200000098797.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-B5WD2_l01n02_vgt2_b.35200000098797.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1785326
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCT	4111	0.2302660690540551	Illumina Single End PCR Primer 1 (96% over 32bp)
CGATTACTTAAGCGTCTACGAGCGTAGCCTGCATATTTATGGTTTCACTC	2865	0.16047489366087764	No Hit
GTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGGG	2663	0.14916043344464822	No Hit
CGCATTTTTAAATGGCGTACATGCCTCTTTTCATTCGGTAAAGAGGACTT	2417	0.13538143733973515	No Hit
CTGCCTTCTCATATCCTATGAATTCAGATATGGATACCACTCCATTACGA	2155	0.12070624636620986	No Hit
CCTCGATCGATTAGTATCTGTCAGCTCCATGTGTCGCCACACTTCCACCT	2154	0.1206502341869216	No Hit
CGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACA	1990	0.11146423678364624	No Hit
CCCAATAGTGCCGTTGCAGCTTTCCTTTGTTTTGAACCCGCTCTCAGCAG	1965	0.11006393230143963	No Hit
CACCGATATGCTTCGGGGAGCTGTAAGCAAGCTTTGATCCGGAGATTTCC	1864	0.10440670219332492	No Hit
CGAACACCGATATGCTTCGGGGAGCTGTAAGCAAGCTTTGATCCGGAGAT	1832	0.10261431245610045	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTGGTC	725	57.931034	52
GTGTAGA	1015	55.86207	41
TAGATCT	1015	51.724136	44
AGATCTC	990	51.262627	45
TGTAGAT	1100	50.272724	42
ATCTCGG	1095	47.30594	47
TCTCGGT	1030	45.873783	48
GTGCCTC	860	45.581394	31
TCTATGT	905	44.86188	36
TGGTCGC	890	44.83146	54
GTCGCCG	925	43.891888	56
ATGTGTA	1280	43.75	39
GAGTGTG	1180	43.601696	27
AGTGTGC	1205	41.825726	28
CCTCTAT	1005	39.701492	34
CCCTATG	205	37.56097	35
GTGCCCC	235	37.23404	31
GTGGTCG	1150	37.130432	53
CTCTATG	1075	37.11628	35
TGTGTAG	1540	36.81818	40