000000000-B5WD2_l01n01_vgt2_n.351000000987f7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-B5WD2_l01n01_vgt2_n.351000000987f7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1510318
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCGATAGATCTCGTAT	39403	2.6089207703278383	TruSeq Adapter, Index 1 (97% over 36bp)
CGCATTTTTAAATGGCGTACATGCCTCTTTTCATTCGGTAAAGAGGACTT	2450	0.1622174932696293	No Hit
CCCAATAGTGCCGTTGCAGCTTTCCTTTGTTTTGAACCCGCTCTCAGCAG	2169	0.14361213995992897	No Hit
CGATTACTTAAGCGTCTACGAGCGTAGCCTGCATATTTATGGTTTCACTC	2168	0.14354592873818628	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCGATAGACCTCGTAT	2078	0.13758691878134274	TruSeq Adapter, Index 1 (97% over 36bp)
CCTCGATCGATTAGTATCTGTCAGCTCCATGTGTCGCCACACTTCCACCT	1927	0.12758902429819416	No Hit
GCGAGGTTTCTTATAAGCTTTTTTCATTGAGCATCCCTCCTAAAATAGAG	1794	0.11878293180641428	No Hit
GTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGGG	1730	0.11454541361488112	No Hit
GCGTCTACGAGCGTAGCCTGCATATTTATGGTTTCACTCATCTTCTTGCC	1598	0.10580553234484392	No Hit
CGGGGAGGTAGCGGTGCCCTGTACCTGCAATCCGCTCTAGCAGGGCCGAA	1594	0.10554068745787311	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	5165	63.630203	47
TAGATCT	4585	62.9771	39
GCGATAG	5320	62.894737	35
CGTATGC	5310	62.683617	46
AGATCTC	4615	62.643555	40
GATAGAT	4785	62.466038	37
ATAGATC	4670	62.35546	38
CGATAGA	5350	62.28037	36
TCGTATG	5320	62.236843	45
CTCGTAT	5215	62.08054	44
GTCACAG	5500	61.599995	29
AGTCACA	5505	61.54405	28
CACAGCG	5490	61.52095	31
AGCGATA	5475	61.305935	34
TATGCCG	5375	61.013954	48
GCCGTCT	5310	60.574387	51
GTCTTCT	5385	59.860725	54
TCCAGTC	5645	59.645706	25
ACTCCAG	5705	59.57055	23
ATGCCGT	5515	59.33817	49