Basic Statistics
Measure | Value |
---|---|
Filename | 000000000-B56MK_l01n02_s1_p6-740.352000000a11ff.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 142475 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATGTTGGATGAGGGGGTAGAACCAGATGACGTCGATTGCTGGTGCAACAC | 237 | 0.166344972802246 | No Hit |
CTATATGTACTTAGACAGAAGCGATGCTGGGGAGGCCATATCTTTTCCAA | 196 | 0.1375679943849798 | No Hit |
GTATAGAGTGATGACTCGCAGACTGCTAGGTTCAACACAAGTTGGAGTGG | 191 | 0.1340586067731181 | No Hit |
CTTAATACATTCACCAACCTGGTGGTGCAGCTCATTCGGAACATGGAGGC | 172 | 0.1207229338480435 | No Hit |
CTCTATACACTCCATCTGTGGTCTCCCCCTTTTTTACTTCCTTGGGAGCA | 167 | 0.11721354623618178 | No Hit |
ACTCTATATCAACAGTTGGCTTGTCCTGTGCCATTACGGTAACACAACCT | 145 | 0.10177224074399016 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTTCCG | 45 | 1.20119876E-4 | 64.32651 | 9 |
ATGTAGT | 40 | 0.006084209 | 54.275494 | 6 |
TATAAAG | 70 | 1.7069924E-5 | 51.690945 | 2 |
TCTGAGA | 45 | 0.009692188 | 48.24488 | 3 |
CATGTAG | 45 | 0.009692188 | 48.24488 | 5 |
TGTAGTG | 45 | 0.009692188 | 48.24488 | 7 |
CTATTAA | 60 | 4.975457E-4 | 48.24488 | 1 |
TTAAGGT | 65 | 7.381632E-4 | 44.533737 | 4 |
GTATAAA | 85 | 5.3761552E-5 | 42.56901 | 1 |
ATAAAGG | 85 | 5.3761552E-5 | 42.56901 | 3 |
AAGGTGT | 90 | 7.5309945E-5 | 40.204067 | 6 |
GAGGGAT | 75 | 0.0014924892 | 38.595905 | 7 |
AGGTGTT | 95 | 1.0355665E-4 | 38.088066 | 7 |
TCTTTAC | 80 | 0.0020491083 | 36.183662 | 1 |
TTCTATC | 100 | 1.400477E-4 | 36.18366 | 3 |
TCTATCT | 100 | 1.400477E-4 | 36.18366 | 4 |
CTATCTG | 105 | 1.8657427E-4 | 34.46063 | 5 |
GGATACC | 85 | 0.0027588003 | 34.05521 | 3 |
ATCGAGC | 150 | 1.1410793E-6 | 33.771416 | 145 |
TCATATA | 90 | 0.003650474 | 32.163254 | 2 |