FastQCFastQC Report
Thu 26 Oct 2017
000000000-B4Y9M_l01n02_621.352000000a2c7a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-B4Y9M_l01n02_621.352000000a2c7a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11078
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGTTAA100.006996915145.06
AACGGGA100.006996915145.02
CCGTATC200.006025585329.0140-144
TCGTGTA1359.194002E-49.666666135-139
GTAGGGA1400.00128247189.321428140-144
TAGGGAA1400.00128247189.321428140-144
AAAAAAA2750.00177867367.909091145
GAGCGTC1700.0074290937.6764703130-134
AGAGCGT1700.0074290937.6764703130-134
CGGAAGA2050.0049080997.0731707125-129
Produced by FastQC (version 0.11.2)