FastQCFastQC Report
Thu 4 Jan 2018
000000000-B4NWY_l01n01_e4_wholepop_270.351000000b0c65.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-B4NWY_l01n01_e4_wholepop_270.351000000b0c65.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences778708
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCATAAG100.0072438694143.966231
GGGGCAT100.0072438694143.966233
TCACGGG100.0072438694143.966231
CGGACAC100.0072438694143.966231
TCCGGCC151.2654596E-4143.966231
TCCGGCA100.0072438694143.966231
TCCGGAG100.0072438694143.966231
AGCACAA100.0072438694143.966231
CCTTCGC100.0072438694143.966231
TATTTTA151.2654596E-4143.966232
GTTGATG151.2654596E-4143.966231
GTTGATC100.0072438694143.966231
CTTAATC151.2654596E-4143.966231
CTTGTGC100.0072438694143.966232
TCTGCCC151.2654596E-4143.966231
GCCCCTA100.0072438694143.966232
TCTGCAG100.0072438694143.966231
TCGCCGC151.2654596E-4143.966232
CTGCTGT253.8726284E-8143.966233
TTGATGC100.0072438694143.966232
Produced by FastQC (version 0.11.2)