FastQCFastQC Report
Wed 3 Aug 2016
000000000-ARM7R_l01n01.331000000663e9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-ARM7R_l01n01.331000000663e9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15168580
Sequences flagged as poor quality0
Sequence length251
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA303213819.989596916784564No Hit
TACAGGGGGTGCGAGCGTTAATCGGAATGACTGGGCGTAAAGGGTATGTA8778525.787305074041209No Hit
TACGGGGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA7181304.734325823511496No Hit
TACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA6646254.381590102699132No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA6126394.038868503182236No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGCA5311673.5017582397297566No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA5258833.46692307388035No Hit
TACGTATGTCACAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA5026843.313981928433644No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA4817053.1756762992976273No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA4707263.103296419308861No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA3416082.2520763314693926No Hit
TACAGGGGGTGCGAGCGTTAATCGGAATGACTGGGCGTAAAGGGTACGTA3339982.201906836368335No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA2446021.612557009291575No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTA2128061.4029394973029776No Hit
TACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGAGCGTA2096391.3820608125480434No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA1723141.135992953855931No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA1633831.0771146672925218No Hit
TACGGGGGGTGCAAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCA1072940.7073437329005088No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA1055730.6959979114722671No Hit
TACGTATGTCGCGAGCGTTATCCGGAATTATTGGGCATAAAGGGCATCTA950440.626584690195127No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCA928070.6118371001108871No Hit
TACGGAGGGTGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTCCGTA920940.6071365941966882No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA886660.5845372473890107No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA808030.5326998308345277No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA647190.42666485590609005No Hit
TACGGAGGGTGCGAGCATTATCCGGATTTACTGGGTTTAAAGGGTGCGCA636720.41976242997037294No Hit
TACGGAGGATGCGAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTA590070.38900806799318066No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTA583010.38435371010338476No Hit
TACGTAGGTCTCAAGCGTTATCCGGATTTACTGGGCGTAAAGTGTCCGTA532130.35081068893726375No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA514400.33912205361345626No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGGGCGCA511150.33697946676617063No Hit
TACGTAGGTCCCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA498370.328554156025152No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCA465240.3067129553326679No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGTGTA463360.3054735512486996No Hit
TACGGAGGATGCGAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCTGTA453990.2992963085536023No Hit
TACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTA439810.2899480373245221No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGTGTA390830.25765760539219884No Hit
TACGTAGGGCGCAAGCGTTGTCCGGCATTATTGGGCGTAAAGAGCTCGTA342800.2259934680767745No Hit
TACGGAGGATGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA340620.22455628674536446No Hit
TACGTATGTCACGAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA305220.20121857154723777No Hit
TACGGAGGGTGCAAGCGTTACTCGGAATCACTGGGCGTAAAGGACGCGTA286130.18863334603502765No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA272870.17989159169810226No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCTCGTA264310.1742483475710976No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTA263160.17349020145590424No Hit
TACGGAGGATACGAGCGTTATCCGGAATTATTGGGTTTAAAGGGTGCGTA232680.1533960331158223No Hit
TACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTA218950.14434442775790482No Hit
TACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTA193620.12764543549890628No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGCA185710.12243070874135879No Hit
TACGGAAGGTTCTGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA183380.12089463878622786No Hit
TACGTAGGGCGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGCA179900.11860042271590353No Hit
TACGTATGTCGCAAGCGTTATCCGGAATTATTGGGCTTAAAGGGCATCTA164040.10814459890114961No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGAGTGCGCA155430.10246839189957135No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGTAT902750.0244.344481
GTAGGGC3452550.0244.344094
TAGGTCC1007450.0244.227875
TCACAAG568600.0243.947979
TAGGGCG3457750.0243.895315
GTCCCGA952900.0243.891168
TACGGAG1946550.0243.878941
GTGCGAG4640950.0243.793129
TGTCACA566150.0243.686427
GTCACAA569400.0243.62678
GTAGGTC1159350.0243.54744
CGTAGGG5272650.0243.48683
GTAGGGT1498100.0243.331854
AGGATGC763350.0243.113656
CGAACAG482450.0243.06259245
ACGGAGG1956100.0243.019532
TCCCGAG957150.0243.012579
CGAACCG62150.0242.93333245
GGTCCAG285100.0242.791768
AGGTCCC1016050.0242.714196
Produced by FastQC (version 0.11.2)