FastQCFastQC Report
Tue 19 Jul 2016
000000000-APTJP_l01n01_w8.35100000065e83.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-APTJP_l01n01_w8.35100000065e83.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1927024
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACACT5850.017.3076934
GTATTGG8900.017.1910111
GACTGTC2450.016.5306137
TAAGACT5100.015.8823534
TTATACT13500.015.8333334
TATTGGG9700.015.3092782
TAAGGCT4300.015.1744194
GTCCTAC2559.094947E-1215.01
TTAAGAC3600.015.03
CTGTGCG2559.094947E-1215.09
TATACTT13550.014.944655
ACTGTGT5600.014.8660718
ATACTGT8350.014.8203596
CTAGGCT4100.014.8170734
TACTGTG6550.014.7709927
CTGGACT2601.0913936E-1114.7115374
AAGGCTG4750.014.684215
TAAGGGT4450.014.6629224
ACTGTGC5150.014.4174768
GGACCGT2052.1804226E-814.2682926
Produced by FastQC (version 0.11.2)