FastQCFastQC Report
Tue 28 Jun 2016
000000000-AP76Y_l01n02_04b9092010.3520000005a5a4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-AP76Y_l01n02_04b9092010.3520000005a5a4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10325
Sequences flagged as poor quality0
Sequence length251
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGACT100.0014550915244.99998245
GAGCTAT150.004896148163.333331
GCTATGA150.004896148163.333333
GCAGTGC150.004896148163.333338
ATAGAGT150.004896148163.333334
AGAGTTA150.004896148163.333336
TATTCTC150.004896148163.333335
ACACTAA150.004896148163.333336
GCTCAAC150.004896148163.333331
TAAAGCC150.00908257149.0135-139
TTTTTTT3404.6333775E-47.926470360-64
Produced by FastQC (version 0.11.2)