000000000-AKRU9_l01n01_exp163gap1bff_89.3510000004f8e8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_89.3510000004f8e8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	437496
Sequences flagged as poor quality	0
Sequence length	46
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	4366	0.9979519812752574	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTGCGACTATCGAACCATATACCGTACGCTGCA	2094	0.47863294750123425	No Hit
GTCCACGAGGTCTCTCCGCATACGCAATAAGTGGACGTACGCTGCA	538	0.12297255289191215	No Hit
GTCCACGAGGTCTCTGACGATATGATAACCTCTGCCGTACGCTGCA	532	0.12160111178159343	No Hit
GTCCACGAGGTCTCTGCGTGACAGTTTGTTCAATTCGTACGCTGCA	503	0.11497247974838627	No Hit
GTCCACGAGGTCTCTCCTAGCTGATGACTGTACTTGTACGCTGCAG	488	0.11154387697258947	No Hit
GTCCACGAGGTCTCTAGTACAGACTCACCCAGTAGCGTACGCTGCA	486	0.11108672993581656	No Hit
GTCCACGAGGTCTCTACGTATCCTCAGTCTTGATCGTACGCTGCAG	457	0.10445809790260939	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGACAA	40	1.9235813E-8	40.000004	22
CCTTCGC	20	0.0012549162	40.000004	28
ATTTATT	40	1.9235813E-8	40.000004	27
ATTTATA	20	0.0012549162	40.000004	24
GTGTTTA	20	0.0012549162	40.000004	28
ACAACTT	20	0.0012549162	40.000004	24
GTTTGTT	40	1.9235813E-8	40.000004	24
GTTGAGA	20	0.0012549162	40.000004	24
GTGTTGC	40	1.9235813E-8	40.000004	30
ATCCTGT	20	0.0012549162	40.000004	28
AAACTTT	20	0.0012549162	40.000004	24
CTTCGGT	20	0.0012549162	40.000004	14
GTTGAAA	20	0.0012549162	40.000004	21
TGTTTCC	40	1.9235813E-8	40.000004	30
GAGGATG	40	1.9235813E-8	40.000004	23
AGACTTA	20	0.0012549162	40.000004	27
AGGTATT	20	0.0012549162	40.000004	27
AGCAATT	40	1.9235813E-8	40.000004	23
ATGGGCG	20	0.0012549162	40.000004	26
CTAGAAT	40	1.9235813E-8	40.000004	14