000000000-AKRU9_l01n01_exp163gap1bff_85.3510000004f8a5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_85.3510000004f8a5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	461820
Sequences flagged as poor quality	0
Sequence length	46
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	2190	0.47421073145381315	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTGCGACTATCGAACCATATACCGTACGCTGCA	2091	0.45277380797713396	No Hit
GTCCACGAGGTCTCTGACGATATGATAACCTCTGCCGTACGCTGCA	565	0.12234203802347235	No Hit
GTCCACGAGGTCTCTCCGCATACGCAATAAGTGGACGTACGCTGCA	562	0.12169243428175479	No Hit
GTCCACGAGGTCTCTGCGTGACAGTTTGTTCAATTCGTACGCTGCA	549	0.11887748473431206	No Hit
GTCCACGAGGTCTCTCCTAGCTGATGACTGTACTTGTACGCTGCAG	526	0.11389718938114417	No Hit
GTCCACGAGGTCTCTAGTACAGACTCACCCAGTAGCGTACGCTGCA	512	0.11086570525312893	No Hit
GTCCACGAGGTCTCTACGTATCCTCAGTCTTGATCGTACGCTGCAG	498	0.10783422112511368	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGGAT	25	7.787405E-5	40.0	15
TCCGGAA	20	0.001254989	40.0	15
TCGCCTA	30	4.8611837E-6	40.0	15
ATTTATT	25	7.787405E-5	40.0	27
ATTTATA	55	5.456968E-12	40.0	24
ACAACTA	20	0.001254989	40.0	24
GTTTGTT	60	0.0	40.0	24
GTTTGTC	20	0.001254989	40.0	30
ATTTAGG	35	3.051082E-7	40.0	18
GTTGAGG	20	0.001254989	40.0	25
GTTGAGA	30	4.8611837E-6	40.0	24
GTGTTGC	40	1.9239451E-8	40.0	30
CTTAAGA	80	0.0	40.0	14
TCGCCCT	20	0.001254989	40.0	15
TCGCCCC	20	0.001254989	40.0	30
TTCTATG	30	4.8611837E-6	40.0	15
ACAACGC	45	1.2187229E-9	40.0	25
ATCCTGT	45	1.2187229E-9	40.0	28
GTTTGGT	20	0.001254989	40.0	19
AAACTTT	30	4.8611837E-6	40.0	22