000000000-AKRU9_l01n01_exp163gap1bff_73.3510000004f7e9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_73.3510000004f7e9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	524919
Sequences flagged as poor quality	0
Sequence length	46
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCACGAGGTCTCTGCGACTATCGAACCATATACCGTACGCTGCA	2406	0.4583564321352437	No Hit
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	1066	0.20307895122866573	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTGCGTGACAGTTTGTTCAATTCGTACGCTGCA	700	0.13335390793627208	No Hit
GTCCACGAGGTCTCTGACGATATGATAACCTCTGCCGTACGCTGCA	613	0.11677992223562111	No Hit
GTCCACGAGGTCTCTCCGCATACGCAATAAGTGGACGTACGCTGCA	594	0.11316031616306517	No Hit
GTCCACGAGGTCTCTACGTATCCTCAGTCTTGATCGTACGCTGCAG	575	0.10954071009050921	No Hit
GTCCACGAGGTCTCTCCTAGCTGATGACTGTACTTGTACGCTGCAG	575	0.10954071009050921	No Hit
GTCCACGAGGTCTCTAGTACAGACTCACCCAGTAGCGTACGCTGCA	559	0.10649262076625156	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTGTTG	20	0.0012551454	40.000004	28
TCCGGCT	60	0.0	40.000004	15
TCCGGAT	30	4.8624534E-6	40.000004	15
TCGCCTA	40	1.9248546E-8	40.000004	15
CTTAATT	20	0.0012551454	40.000004	29
ATTTATA	20	0.0012551454	40.000004	24
CTTGTCC	40	1.9248546E-8	40.000004	14
CTTGTAT	40	1.9248546E-8	40.000004	14
ATTTAGT	30	4.8624534E-6	40.000004	27
GTTGAGG	30	4.8624534E-6	40.000004	25
ACAACGC	80	0.0	40.000004	25
TTGATCA	20	0.0012551454	40.000004	15
CATGGTT	20	0.0012551454	40.000004	20
GTTTGGA	30	4.8624534E-6	40.000004	29
ACAACAT	20	0.0012551454	40.000004	25
AGCGTTT	30	4.8624534E-6	40.000004	16
GTTTGCG	40	1.9248546E-8	40.000004	31
TGTTTCC	30	4.8624534E-6	40.000004	30
ATCCTAC	40	1.9248546E-8	40.000004	22
CGTGGTA	20	0.0012551454	40.000004	19