000000000-AKRU9_l01n01_exp163gap1bff_62.3510000004f73c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_62.3510000004f73c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	267387
Sequences flagged as poor quality	0
Sequence length	46
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	7860	2.939559514860483	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTTATCCCTAGTGACTGTCGTACGCTGCAGGTC	2797	1.0460493591685458	No Hit
GTCCACGAGGTCTCTGCGACTATCGAACCATATACCGTACGCTGCA	1136	0.4248523675421767	No Hit
GTCCACGAGGTCTCTGCGTGACAGTTTGTTCAATTCGTACGCTGCA	402	0.15034388358446746	No Hit
TTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAA	386	0.1443600474219016	No Hit
GTCCACGAGGTCTCTAGACGGACTCGCATTCACTGCGTACGCTGCA	382	0.1428640883812601	No Hit
CGTGTAGCGAACTGCGATGGGCATACTGTAACCATAAGGCCACGTA	340	0.12715651845452472	No Hit
GTCCACGAGGTCTCTAGATGTACCCAATTCTTCGACGTACGCTGCA	317	0.11855475397083627	No Hit
GTCCACGAGGTCTCTATGACGTGTCGATCACTCCTCGTACGCTGCA	314	0.11743278469035517	No Hit
GTCCACGAGGTCTCTAGTACAGACTCACCCAGTAGCGTACGCTGCA	288	0.10770905092618564	No Hit
GTCCACGAGGTCTCTACGTATCCTCAGTCTTGATCGTACGCTGCAG	286	0.10696107140586492	No Hit
GTCCACGAGGTCTCTCTTGACAGGAGTGATAAACCGTACGCTGCAG	283	0.1058391021253838	No Hit
GTCCACGAGGTCTCTAGTATCTCACTACGGCTCATCGTACGCTGCA	272	0.10172521476361977	No Hit
GTCCACGAGGTCTCTAGCTGGCATCGACTCTATCTCGTACGCTGCA	271	0.1013512250034594	No Hit
AGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGG	271	0.1013512250034594	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTCAA	30	4.853491E-6	40.000004	21
TCCGGCT	30	4.853491E-6	40.000004	15
CTTGTAT	30	4.853491E-6	40.000004	14
ACAACGC	30	4.853491E-6	40.000004	25
TCTTGTT	30	4.853491E-6	40.000004	13
AGCCGCG	30	4.853491E-6	40.000004	31
AATCCGC	30	4.853491E-6	40.000004	26
GCCTTGA	30	4.853491E-6	40.000004	19
TCTTGGC	60	0.0	40.000004	13
AAATCGC	30	4.853491E-6	40.000004	25
CGAACAA	30	4.853491E-6	40.000004	22
GCAAGAA	30	4.853491E-6	40.000004	24
TTAATAA	60	0.0	40.000004	24
GGGCTCG	30	4.853491E-6	40.000004	17
GAAGAGT	30	4.853491E-6	40.000004	16
ACGTTCC	30	4.853491E-6	40.000004	27
CAGCCCT	30	4.853491E-6	40.000004	18
GACGTCT	30	4.853491E-6	40.000004	17
GGCGTCA	30	4.853491E-6	40.000004	18
AGCTTAG	30	4.853491E-6	40.000004	27