000000000-AKRU9_l01n01_exp163gap1bff_41.3510000004f5eb.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_41.3510000004f5eb.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	416954
Sequences flagged as poor quality	0
Sequence length	46
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCACGAGGTCTCTTATCCCTAGTGACTGTCGTACGCTGCAGGTC	8044	1.9292296032655882	No Hit
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	2687	0.6444355972121625	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTGCGACTATCGAACCATATACCGTACGCTGCA	1626	0.3899710759460276	No Hit
GTCCACGAGGTCTCTATGACGTGTCGATCACTCCTCGTACGCTGCA	527	0.12639283949788224	No Hit
GTCCACGAGGTCTCTGGCCCGCACACAATTAGGAACGTACGCTGCA	458	0.10984425140423164	No Hit
GTCCACGAGGTCTCTCAGACGAGCTAATTCTATCCCGTACGCTGCA	440	0.1055272284232793	No Hit
GTCCACGAGGTCTCTAGACGGACTCGCATTCACTGCGTACGCTGCA	435	0.10432805537301476	No Hit
GTCCACGAGGTCTCTCACGGTTATCAGATGTGGATCGTACGCTGCA	432	0.10360855154285604	No Hit
GTCCACGAGGTCTCTCCCTGCACATTGCGTAATATCGTACGCTGCA	431	0.10336871693280314	No Hit
GTCCACGAGGTCTCTAGTACAAACTAACGGGTTGCCGTACGCTGCA	425	0.10192970927248571	No Hit
GTCCACGAGGTCTCTAGATGTACCCAATTCTTCGACGTACGCTGCA	423	0.10145004005237988	No Hit
GTCCACGAGGTCTCTAGTACAGACTCACCCAGTAGCGTACGCTGCA	423	0.10145004005237988	No Hit
GTCCACGAGGTCTCTGAAGAGTTCAAGCCATCCCCGTACGCTGCAG	420	0.10073053622222117	No Hit
GTCCACGAGGTCTCTACGAACGTGGCATGTTTGATCGTACGCTGCA	418	0.10025086700211534	No Hit
GTCCACGAGGTCTCTACCCAGTAGTGAACAGGAGCCGTACGCTGCA	418	0.10025086700211534	No Hit
GTCCACGAGGTCTCTGCGTGACAGTTTGTTCAATTCGTACGCTGCA	417	0.10001103239206242	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAC	30	4.860043E-6	40.000004	30
TCCGGAA	60	0.0	40.000004	15
TCGCCTA	30	4.860043E-6	40.000004	15
GTTTGTA	30	4.860043E-6	40.000004	33
AGCGTTT	30	4.860043E-6	40.000004	16
GTTTGAT	30	4.860043E-6	40.000004	29
CTATGTA	120	0.0	40.000004	14
TTAGGTC	30	4.860043E-6	40.000004	15
TTCTAGT	30	4.860043E-6	40.000004	29
AACAATG	30	4.860043E-6	40.000004	24
TAATATG	30	4.860043E-6	40.000004	15
CGTGGGC	30	4.860043E-6	40.000004	28
CGGGTAG	30	4.860043E-6	40.000004	29
GAAATAA	30	4.860043E-6	40.000004	20
AACAACG	30	4.860043E-6	40.000004	24
TAATAAT	30	4.860043E-6	40.000004	25
CTGTCCG	120	0.0	40.000004	31
AAATCGC	30	4.860043E-6	40.000004	25
CCGGGAG	30	4.860043E-6	40.000004	16
CGTATTG	30	4.860043E-6	40.000004	17