000000000-AKRU9_l01n01_exp163gap1bff_35.3510000004f58e.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_35.3510000004f58e.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1561
Sequences flagged as poor quality	0
Sequence length	46
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAAATAATCTCTTTAATAACCTGATTCAGCGAAACCAATCCGCGGC	374	23.959000640614992	No Hit
GCGCCAACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAG	304	19.47469570787956	No Hit
GGAGTGGCATTAACACCATCCTTCATGAACTTAATCCACTGTTCAC	254	16.27162075592569	No Hit
AACATACGAAGGCGCATAACGATACCACTGACCCTCAGCAATCTTA	219	14.029468289557975	No Hit
AAGACGGAGAGCGCCAACGGCGTCCATCTCGAAGGAGTCGCCAGCG	168	10.762331838565023	No Hit
AGTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATA	125	8.00768737988469	No Hit
AGTGACTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATA	3	0.19218449711723257	No Hit
GGAGTGGCATTAACACCATCCTTCATGAACTTAATCCACCGTTCAC	2	0.12812299807815503	No Hit
CAACTAATCTCTTTAATAACCTGATTCAGCGAAACCAATCCGCGGC	2	0.12812299807815503	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCATG	20	9.0670824E-4	40.0	21
ACTGTTC	20	9.0670824E-4	40.0	38
TGGTTTA	20	9.0670824E-4	40.0	36
TGGCATT	20	9.0670824E-4	40.0	5
CGTCAAG	20	9.0670824E-4	40.0	26
ACCGGAG	25	4.7554953E-5	40.0	40
AATCTTA	30	2.4167039E-6	40.0	40
TCCTTCA	20	9.0670824E-4	40.0	19
TTCATGA	20	9.0670824E-4	40.0	22
AAACCAA	40	5.627953E-9	40.0	32
GGCATTA	20	9.0670824E-4	40.0	6
ATCTCTT	40	5.627953E-9	40.0	7
TGGCACG	20	9.0670824E-4	40.0	17
AATCCGC	40	5.627953E-9	40.0	37
CCAATCC	40	5.627953E-9	40.0	35
CATGAAC	20	9.0670824E-4	40.0	24
AACCGGA	25	4.7554953E-5	40.0	39
AATCTCT	40	5.627953E-9	40.0	6
AATCCAC	20	9.0670824E-4	40.0	33
GGCACGT	20	9.0670824E-4	40.0	18