000000000-AKRU9_l01n01_exp163gap1bff_26.3510000004f4f9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_26.3510000004f4f9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	324061
Sequences flagged as poor quality	0
Sequence length	46
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	8726	2.692702917043396	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTTATCCCTAGTGACTGTCGTACGCTGCAGGTC	4205	1.2975952058408755	No Hit
GTCCACGAGGTCTCTGCGACTATCGAACCATATACCGTACGCTGCA	1816	0.5603883219517313	No Hit
CTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCAC	467	0.14410867089838025	No Hit
ACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACT	454	0.14009708048793282	No Hit
GTCCACGAGGTCTCTCCTAGCTGATGACTGTACTTGTACGCTGCAG	442	0.13639407395521214	No Hit
GTCCACGAGGTCTCTAGTACAGACTCACCCAGTAGCGTACGCTGCA	404	0.12466788660159661	No Hit
GTCCACGAGGTCTCTGCGTGACAGTTTGTTCAATTCGTACGCTGCA	395	0.1218906317020561	No Hit
GTCCACGAGGTCTCTGACGATATGATAACCTCTGCCGTACGCTGCA	394	0.12158204782432938	No Hit
CGAGAAATAAAAGTCTGAAACATGATTAAACTCCTAAGCAGAAAAC	372	0.11479320251434144	No Hit
GTCCACGAGGTCTCTGGCCCGCACACAATTAGGAACGTACGCTGCA	362	0.1117073637370742	No Hit
GTCCACGAGGTCTCTGTAGAACACACTGCCCCGTACGCTGCAGGTC	353	0.10893010883753368	No Hit
TTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTTCA	353	0.10893010883753368	No Hit
GTCCACGAGGTCTCTCACGGTTATCAGATGTGGATCGTACGCTGCA	343	0.10584427006026643	No Hit
GTCCACGAGGTCTCTCAGACGAGCTAATTCTATCCCGTACGCTGCA	341	0.10522710230481298	No Hit
CTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATAT	335	0.10337559903845264	No Hit
GTCCACGAGGTCTCTTGTGTGTCAACAACCACCAACGTACGCTGCA	334	0.10306701516072592	No Hit
GTCCACGAGGTCTCTCCGCATACGCAATAAGTGGACGTACGCTGCA	326	0.10059834413891212	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCATAAT	60	0.0	40.000004	23
TGATCGC	30	4.8566853E-6	40.000004	15
TCCGGCT	30	4.8566853E-6	40.000004	15
CTTAATT	30	4.8566853E-6	40.000004	29
CTTGTCC	30	4.8566853E-6	40.000004	14
ACAACGC	60	0.0	40.000004	25
GAGGATG	30	4.8566853E-6	40.000004	23
CAGGTGA	30	4.8566853E-6	40.000004	17
GAAATAG	30	4.8566853E-6	40.000004	24
AACAAGC	60	0.0	40.000004	24
GGAATAT	30	4.8566853E-6	40.000004	24
CAGAAAA	60	0.0	40.000004	39
CCTTAAT	30	4.8566853E-6	40.000004	28
GCCTTAA	30	4.8566853E-6	40.000004	27
AGATCTC	30	4.8566853E-6	40.000004	8
CAAACCG	30	4.8566853E-6	40.000004	31
GCAAGAA	30	4.8566853E-6	40.000004	24
TTAATTC	30	4.8566853E-6	40.000004	30
GTCGAGT	30	4.8566853E-6	40.000004	17
CAAGTGG	30	4.8566853E-6	40.000004	25