000000000-AKRU9_l01n01_exp163gap1bff_23.3510000004f4c2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-AKRU9_l01n01_exp163gap1bff_23.3510000004f4c2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2021
Sequences flagged as poor quality	0
Sequence length	46
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATAGTGTTATTAATATCAAGTTGGGGGAGCACATTGTAGCATTGTG	363	17.96140524492825	No Hit
GGAAACGTACGGATTGTTCAGTAACTTGACTCATGATTTCTTACCT	357	17.664522513607125	No Hit
AGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA	269	13.310242454230577	No Hit
GTTGAACACGACCAGAAAACTGGCCTAACGACGTTTGGTCAGTTCC	257	12.716476991588321	No Hit
AACTTTACCGCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGG	232	11.479465611083622	No Hit
GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTAC	139	6.877783275606135	No Hit
TTCGTATTCTGGCGTGAAGTCGCCGACTGAATGCCAGCAATCTCTT	133	6.580900544285008	No Hit
GTCCACGAGGTCGACATCTCGTATGCCGTCTTCTGCTTGAAAAAAA	19	0.9401286491835725	Illumina PCR Primer Index 11 (96% over 28bp)
GTCCACGAGGTCTCTTATCCCTAGTGACTGTCGTACGCTGCAGGTC	5	0.24740227610094012	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGGTCT	30	2.8582745E-6	40.000004	7
CATGATT	40	7.608833E-9	40.000004	32
TTGTTCA	40	7.608833E-9	40.000004	14
CATTGTG	30	2.8582745E-6	40.000004	40
CATTGTA	30	2.8582745E-6	40.000004	32
AAACCAA	30	2.8582745E-6	40.000004	30
TCAAGTT	30	2.8582745E-6	40.000004	16
ACTAAAA	30	2.8582745E-6	40.000004	25
AACAACT	30	2.8582745E-6	40.000004	17
CACATTG	30	2.8582745E-6	40.000004	30
GTGTTAT	30	2.8582745E-6	40.000004	4
TAGTGTT	30	2.8582745E-6	40.000004	2
GAAACGT	40	7.608833E-9	40.000004	2
TTTCTTA	40	7.608833E-9	40.000004	37
ATGATTT	40	7.608833E-9	40.000004	33
TTGTAGC	30	2.8582745E-6	40.000004	34
GTCGCTA	30	2.8582745E-6	40.000004	40
TGACTCA	40	7.608833E-9	40.000004	27
ACTTGAC	40	7.608833E-9	40.000004	24
CAACTCA	30	2.8582745E-6	40.000004	19