##FastQC 0.11.2 >>Basic Statistics pass #Measure Value Filename 000000000-AGE3A l01n02.3320000000daac.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 16049282 Sequences flagged as poor quality 0 Sequence length 12 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.593666931642176 34.0 23.0 34.0 12.0 34.0 2 29.033684185996606 34.0 24.0 34.0 12.0 34.0 3 28.900404454230415 34.0 24.0 34.0 12.0 34.0 4 28.907883418086865 34.0 24.0 34.0 12.0 34.0 5 29.832523411327685 34.0 31.0 34.0 11.0 34.0 6 31.3666795810554 37.0 26.0 38.0 12.0 38.0 7 31.124978114285735 37.0 26.0 38.0 12.0 38.0 8 31.07098361160331 37.0 26.0 38.0 12.0 38.0 9 31.003891762883846 37.0 26.0 38.0 11.0 38.0 10 31.5345031634437 37.0 27.0 38.0 11.0 38.0 11 31.168860762743154 37.0 26.0 38.0 11.0 38.0 12 30.76155593751795 37.0 26.0 38.0 11.0 38.0 >>END_MODULE >>Per tile sequence quality pass #Tile Base Mean 1101 1 -0.4313737418893808 1101 2 -0.08964510323891162 1101 3 0.007961632122523099 1101 4 -0.007343139548353861 1101 5 -0.05260660496884739 1101 6 0.07125869585527767 1101 7 0.05503701453362808 1101 8 0.06665951486965582 1101 9 0.1494014605665086 1101 10 0.07843925506666594 1101 11 0.021049949835543202 1101 12 0.16336312552821042 1102 1 -0.04117456676825526 1102 2 0.02980790996352667 1102 3 -0.013797767235299574 1102 4 -0.008446915990294457 1102 5 -0.0541073364323168 1102 6 -0.10832697153609061 1102 7 -0.11087544731826426 1102 8 -0.12909080171770881 1102 9 -0.08800040831007294 1102 10 -0.12984702997870912 1102 11 -0.06177746324475919 1102 12 -0.1109871497367827 1103 1 0.5786789618387225 1103 2 0.4618658632486685 1103 3 0.660367815330229 1103 4 0.5920248276634474 1103 5 0.39821406001250637 1103 6 0.921687509041174 1103 7 1.1000178460306635 1103 8 0.48462895193027933 1103 9 0.5965315478151041 1103 10 0.810345391010582 1103 11 0.8407957257948624 1103 12 0.5608107482329281 1117 1 -0.27163917793902215 1117 2 -0.14517062954983473 1117 3 -0.02674736608440753 1117 4 -0.13285339010256791 1117 5 -0.11682385199560841 1117 6 0.03075815974273155 1117 7 -0.25898772034231143 1117 8 -0.6659956439634236 1117 9 -0.16244735157873436 1117 10 -0.1764391519602455 1117 11 -0.2678099422380562 1117 12 -0.4312118166932848 2117 1 -0.07869938889157169 2117 2 -0.031012650421498478 2117 3 -0.042277732497751686 2117 4 -0.16837216431744295 2117 5 -0.0954892140640844 2117 6 -0.14207950617873877 2117 7 -0.5375829862219348 2117 8 -0.0631300043962888 2117 9 -0.028063288222405447 2117 10 -0.1516061966074176 2117 11 -0.39473473358846434 2117 12 -0.14489096829983694 1116 1 0.032860810216917 1116 2 -0.22590986181779726 1116 3 -0.09213314195924127 1116 4 -0.25682841986077065 1116 5 -0.30115447748047686 1116 6 -0.15341941826521577 1116 7 -0.6599421517977682 1116 8 -0.10627237304829151 1116 9 -0.17570378734543013 1116 10 -0.22860234387549028 1116 11 -0.07133640039002742 1116 12 -0.11512489460944053 2118 1 0.6297608363843565 2118 2 0.46849674887331005 2118 3 0.4979387758294962 2118 4 0.6264717633112902 2118 5 0.33545371776273925 2118 6 0.7807635603855694 2118 7 0.38827947928687223 2118 8 0.8208470827258942 2118 9 0.8020544312209346 2118 10 0.6508344091437159 2118 11 0.7636215539421052 2118 12 0.6622997673470898 1119 1 -0.15263076247896024 1119 2 -0.1226035808397512 1119 3 -0.11717214472581361 1119 4 -0.17498198405760235 1119 5 -0.18069649629575935 1119 6 -0.17635069194877317 1119 7 -0.8430044462579112 1119 8 -0.22383142363115027 1119 9 -0.024737094554559746 1119 10 -0.29873961281276706 1119 11 -0.22069738359921232 1119 12 -0.3854726898019578 2119 1 -0.1467414777569367 2119 2 -0.19293252974816966 2119 3 -0.06613797069795169 2119 4 -0.024968932264755495 2119 5 -0.12489656993957254 2119 6 -0.052393753307367064 2119 7 -0.6384662435733937 2119 8 -0.17675520422900348 2119 9 -0.0018390304242252853 2119 10 -0.1873558572185594 2119 11 -0.11170384383872545 2119 12 -0.1631301889125112 1118 1 -0.0993243566472728 1118 2 -0.40426940567216363 1118 3 -0.2373403649714021 1118 4 -0.19896986314799037 1118 5 -0.16963726607142604 1118 6 -0.1580242182137752 1118 7 -0.17156019632216513 1118 8 0.02445144979815339 1118 9 0.10317131695839166 1118 10 -0.09996884996420263 1118 11 -0.27104812180128235 1118 12 0.016141779388330946 1113 1 -0.1105080650166812 1113 2 -0.19469071110050962 1113 3 -0.2422798518773881 1113 4 -0.27079861619613865 1113 5 -0.23856851831452985 1113 6 -0.2034919516108893 1113 7 -0.2346994945238734 1113 8 -0.1770288318498352 1113 9 -0.07628821344649594 1113 10 -0.09512802737896564 1113 11 -0.3196852795253058 1113 12 -0.15227627944211264 2113 1 0.5482190330616952 2113 2 0.5346856931600428 2113 3 0.29851129054282666 2113 4 0.46494478726274835 2113 5 0.24056080641399902 2113 6 0.7532435492821286 2113 7 0.7336761899491222 2113 8 0.8285358466923292 2113 9 0.8859703163618384 2113 10 0.7613656558322042 2113 11 0.636267399679042 2113 12 0.8433845494620762 1112 1 -0.1435502945604874 1112 2 -0.13745635579931914 1112 3 -0.1835034922589891 1112 4 -0.15678581214923426 1112 5 -0.17246214753525635 1112 6 -0.1392004412336476 1112 7 -0.17907322001886072 1112 8 0.09480420322139693 1112 9 -0.06950831711155203 1112 10 0.006565689433966071 1112 11 -0.33588935173008494 1112 12 -0.15714973700643142 2114 1 -0.19172720487080497 2114 2 -0.2669304169038611 2114 3 -0.05457289970174273 2114 4 -0.25534165993587266 2114 5 -0.09714106760953811 2114 6 -0.05419773795803806 2114 7 -0.07143793890305261 2114 8 0.17857125109172856 2114 9 0.007262856457220579 2114 10 0.094183127348483 2114 11 -0.24946198330660607 2114 12 0.062330622144664005 1115 1 -0.10683853616218641 1115 2 -0.14596821166063734 1115 3 -0.24413069193267134 1115 4 -0.1581035958979271 1115 5 -0.10919467552306372 1115 6 -0.23661208034414116 1115 7 -0.05736106816113562 1115 8 0.13745095369946725 1115 9 -0.0165273324225943 1115 10 -0.19196975625028045 1115 11 -0.113359433521655 1115 12 -0.02694960117210954 1114 1 -0.12650932532191916 1114 2 -0.12804465207240412 1114 3 -0.217072120928119 1114 4 -0.19255432065542166 1114 5 -0.16574760718327397 1114 6 -0.14066433107101872 1114 7 -0.2030832872801298 1114 8 0.07180884207733484 1114 9 -0.007553492436077391 1114 10 -0.25388072290386887 1114 11 -0.29165807628514173 1114 12 -0.09436360033603108 1109 1 -0.1675853718349991 1109 2 -0.0747770042366831 1109 3 -0.286131980578439 1109 4 -0.17316565124581018 1109 5 -0.15231916346940366 1109 6 -0.36441411535665225 1109 7 -0.20469349578561236 1109 8 -0.4149072210461888 1109 9 -0.12747821651580793 1109 10 -0.35470859561025847 1109 11 -0.40976669197695514 1109 12 -0.45464067551020193 1108 1 -0.012423380628945324 1108 2 -0.032190061060550335 1108 3 -0.09853201841318437 1108 4 -0.10630860560747735 1108 5 -0.0705101896831053 1108 6 -0.3827967076425054 1108 7 -0.12367168034557707 1108 8 -0.4645683446977884 1108 9 -0.23099629953221523 1108 10 -0.310726308383817 1108 11 -0.14916032939787627 1108 12 -0.17766966078306012 1111 1 -0.12104934074573137 1111 2 -0.12922528891625618 1111 3 -0.08282103071164926 1111 4 -0.12517657543438432 1111 5 -0.15771098284420404 1111 6 -0.1653968043459919 1111 7 -0.1756748945099531 1111 8 -0.7076955179128142 1111 9 -0.2572789417608732 1111 10 -0.2567770320594214 1111 11 -0.028840501365241522 1111 12 -0.19592982868070408 1110 1 -0.6367538155359611 1110 2 -0.03111787212272432 1110 3 0.3623418260171114 1110 4 0.46823394770681404 1110 5 0.3143358685600255 1110 6 0.6324902345079799 1110 7 0.7032915309385608 1110 8 0.7123120334759001 1110 9 0.6858329813806137 1110 10 0.5496402902294797 1110 11 0.6864275170229881 1110 12 0.7195361367514437 1105 1 0.09594635756717196 1105 2 0.03182134573751583 1105 3 0.09678709101808636 1105 4 0.2161270188011244 1105 5 0.05979348389857009 1105 6 -0.25003805700611537 1105 7 0.1720230687329085 1105 8 -0.2875564231111767 1105 9 0.027360349380760596 1105 10 -0.31911204419055395 1105 11 0.1832184196564306 1105 12 0.0976928951129068 1104 1 0.33762176342724004 1104 2 -0.007855470092518857 1104 3 0.020918106313526863 1104 4 0.0672635777755275 1104 5 0.17766266799806374 1104 6 -0.020619335180324327 1104 7 0.1754635812820169 1104 8 0.10957093306399912 1104 9 0.1053567224492582 1104 10 0.0469834323906646 1104 11 0.26872642978356254 1104 12 0.05565686425776306 1107 1 0.2607003664642349 1107 2 0.19028422266930178 1107 3 0.036031170976070115 1107 4 -0.13529249667116972 1107 5 0.20291474507446594 1107 6 -0.3014260255376122 1107 7 -0.07113091019924411 1107 8 0.09402844462450588 1107 9 -0.1799766990416778 1107 10 -0.17590518521102538 1107 11 -0.13798170978046542 1107 12 0.1193526397651361 1106 1 0.10786398231621064 1106 2 0.2437397502591594 1106 3 0.014757304332650989 1106 4 0.16830370098871583 1106 5 -0.03108986850623552 1106 6 -0.16877384416242336 1106 7 0.23302055980040492 1106 8 0.059343631705136346 1106 9 -0.27243529286871393 1106 10 -0.06656730896852281 1106 11 -0.05572557145914914 1106 12 0.020322733559467565 2101 1 0.06300049418440423 2101 2 0.3393315668779877 2101 3 0.1450541831637686 2101 4 0.25060687306207186 2101 5 0.1728461225419089 2101 6 0.4178021402592478 2101 7 0.50299770744396 2101 8 0.06037257432798171 2101 9 -0.32836131653822775 2101 10 0.1510252363589366 2101 11 0.32228860358248923 2101 12 0.03875112390869617 2106 1 0.1614178454412709 2106 2 -0.15422924181231323 2106 3 0.025932133265925472 2106 4 -0.3879932655701843 2106 5 -0.014360957279020425 2106 6 -0.21393768030028681 2106 7 0.17117767345126111 2106 8 -0.4330198193080541 2106 9 -0.7529543280478848 2106 10 0.08205798582608281 2106 11 -0.07839834255263511 2106 12 -0.07583421753826869 2111 1 0.132105126337283 2111 2 0.017536340832378983 2111 3 -0.22764133689804567 2111 4 0.02391653887383427 2111 5 0.1664398343352964 2111 6 -0.05398627166922765 2111 7 0.15173487500866756 2111 8 0.1656687419363294 2111 9 -0.19242466300027417 2111 10 0.02110704089195181 2111 11 0.07419502327863725 2111 12 -0.07503536815939071 2110 1 -0.05656038253924578 2110 2 0.17730935020789929 2110 3 -0.012486035627457426 2110 4 0.07759654122921944 2110 5 0.15556735422416423 2110 6 0.08629085181833673 2110 7 0.16182683805324416 2110 8 0.10385368704093167 2110 9 -0.04543247712323506 2110 10 0.035371028037467056 2110 11 -0.08446858990973993 2110 12 -0.07049493468723966 2109 1 -0.053086387651053 2109 2 0.019150255236329627 2109 3 0.07817661818740262 2109 4 -0.02120416802147318 2109 5 0.08072833437404014 2109 6 -0.20814475802384536 2109 7 -0.007301182950072871 2109 8 -0.16305653336940296 2109 9 -0.3249354323094309 2109 10 0.009415481803785042 2109 11 -0.14308687306426648 2109 12 -0.5284813740894201 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 167.0 11 8897.0 12 37946.0 13 92395.0 14 165258.0 15 246890.0 16 325929.0 17 393956.0 18 439582.0 19 459362.0 20 459944.0 21 446085.0 22 429343.0 23 407800.0 24 387090.0 25 366532.0 26 349012.0 27 339788.0 28 336675.0 29 343142.0 30 363176.0 31 399082.0 32 465249.0 33 582447.0 34 814276.0 35 1528665.0 36 5860593.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.671275767775228 24.859892302829394 40.527286583475714 13.941545345919664 2 9.003562776647925 26.87409653267935 27.17247128843163 36.9498694022411 3 45.540675622789585 15.932751130720435 16.867808595288476 21.65876465120151 4 15.403693162329205 32.373531250403055 26.744437959557192 25.47833762771055 5 63.08563604811954 9.72400570467923 22.09138216222895 5.09897608497228 6 22.203443257053074 23.93452392041737 25.32928422151746 28.5327486010121 7 19.38036974989721 31.003974570574222 28.55374642639754 21.061909253131027 8 22.998619065863448 23.67092332672099 25.73258577751863 27.59787182989693 9 23.101140792537684 24.883719089970448 28.661651571805614 23.35348854568625 10 18.588284422211814 9.300186095564031 45.50894211398006 26.602587368244095 11 20.31578860137099 16.731285345430738 31.910688086276263 31.04223796692201 12 23.328348686046976 26.585622532599594 21.804847320253618 28.281181461099813 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1170.0 1 1170.0 2 1170.0 3 1170.0 4 5419.0 5 9668.0 6 9668.0 7 9668.0 8 9668.0 9 9668.0 10 9668.0 11 9668.0 12 9668.0 13 29991.5 14 50315.0 15 50315.0 16 50315.0 17 50315.0 18 50315.0 19 50315.0 20 50315.0 21 121698.5 22 193082.0 23 193082.0 24 193082.0 25 193082.0 26 193082.0 27 193082.0 28 193082.0 29 409374.5 30 625667.0 31 625667.0 32 625667.0 33 625667.0 34 625667.0 35 625667.0 36 625667.0 37 625667.0 38 2450779.0 39 4275891.0 40 4275891.0 41 4275891.0 42 4275891.0 43 4275891.0 44 4275891.0 45 4275891.0 46 5212461.0 47 6149031.0 48 6149031.0 49 6149031.0 50 6149031.0 51 6149031.0 52 6149031.0 53 6149031.0 54 5229994.0 55 4310957.0 56 4310957.0 57 4310957.0 58 4310957.0 59 4310957.0 60 4310957.0 61 4310957.0 62 4310957.0 63 2334233.0 64 357509.0 65 357509.0 66 357509.0 67 357509.0 68 357509.0 69 357509.0 70 357509.0 71 210075.5 72 62642.0 73 62642.0 74 62642.0 75 62642.0 76 62642.0 77 62642.0 78 62642.0 79 35601.0 80 8560.0 81 8560.0 82 8560.0 83 8560.0 84 8560.0 85 8560.0 86 8560.0 87 8560.0 88 5224.0 89 1888.0 90 1888.0 91 1888.0 92 1888.0 93 1888.0 94 1888.0 95 1888.0 96 2395.0 97 2902.0 98 2902.0 99 2902.0 100 2902.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.3084697496124748E-4 2 1.2461616662975952E-5 3 6.230808331487976E-6 4 6.230808331487976E-6 5 6.230808331487976E-6 6 6.230808331487976E-6 7 6.230808331487976E-6 8 6.230808331487976E-6 9 6.230808331487976E-6 10 6.230808331487976E-6 11 6.230808331487976E-6 12 1.2461616662975952E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 12 1.6049282E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 4.159298966809633 #Duplication Level Percentage of deduplicated Percentage of total 1 56.48429682436876 2.3493507742256563 2 13.110409220033754 1.0906022304667575 3 5.98986263626565 0.7474088842305404 4 4.011593370481026 0.6674166464440843 5 3.3169477755083667 0.689808872781673 6 2.4552048462500706 0.6127158588188354 7 1.7001561097768945 0.4950020285567085 8 1.3579524305645847 0.4518504113139126 9 1.0332428498209314 0.3867809325951277 >10 8.588819105777102 7.241735411932113 >50 1.0864235611247668 3.150332589590428 >100 0.7237872565082053 5.80411249320706 >500 0.07081249249954127 2.039677415808289 >1k 0.05990475462902562 5.091310586892332 >5k 0.0071532511169576886 1.9866595425589333 >10k+ 0.0034335152745110535 67.19523532057752 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTTGGTCAATCT 796226 4.961131594547345 No Hit TCTAGCGTAGTG 708789 4.416328406467031 No Hit AAGAGATGTCGA 700360 4.363808923040918 No Hit ACGTGTACCCAA 695190 4.331595643967126 No Hit GACTTTCCCTCG 664709 4.141674375215041 No Hit ACGCGCAGATAC 607580 3.7857145260454637 No Hit CTGCTAACGCAA 603431 3.7598629022781207 No Hit TCCAAAGTGTTC 586921 3.656992256725254 No Hit TTAGGGCTCGTA 582353 3.628529924267017 No Hit TCACGGGAGTTG 582301 3.62820592223378 No Hit GGATGGTGTTGC 541764 3.3756276449002516 No Hit TCGAGGACTGCA 539755 3.3631099509622926 No Hit TACAGATGGCTC 538071 3.3526172697320664 No Hit ATCCCGAATTTG 495820 3.089359386918368 No Hit ATGTGCACGACT 491859 3.0646791551173442 No Hit CGGAGCTATGGT 488584 3.044273257831721 No Hit TAGCTCGTAACT 468843 2.921270870559817 No Hit TAGGATTGCTCG 416165 2.5930443492736934 No Hit GCGATATATCGC 383057 2.3867547470347894 No Hit CAGTGCATATGC 360188 2.244262391301991 No Hit >>END_MODULE >>Adapter Content warn >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGTC 1400 0.0 6.000016 1 GTGGGCC 75 1.7513134E-4 6.000016 1 TTATGCA 75 1.7513134E-4 6.000016 1 TCTAGAG 605 0.0 6.000016 1 TTGAGGC 75 1.7513134E-4 6.000016 1 CTGCGAA 1100 0.0 6.000016 1 TCATGGG 600 0.0 6.000016 1 TCGAGGC 275 0.0 6.000016 1 GTTGGAC 350 0.0 6.000016 1 CGGAGCA 350 0.0 6.000016 1 TCGCGGG 275 0.0 6.000016 1 TTGGGGC 75 1.7513134E-4 6.000016 1 CTGTGCT 175 0.0 6.000016 1 TCACGGC 490 0.0 6.0000157 1 TTTAGCG 565 0.0 6.0000157 1 TTAGGGG 205 0.0 6.0000157 1 GACAGGT 90 9.152125E-6 6.0000157 1 GGGTGCA 70 4.6972596E-4 6.0000157 1 GGATGAT 110 1.8152969E-7 6.0000157 1 CCGTGCA 845 0.0 6.0000157 1 >>END_MODULE