FastQCFastQC Report
Fri 12 Jun 2015
000000000-AFM8U l01n01 ve11.3410000000c7cd.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-AFM8U l01n01 ve11.3410000000c7cd.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1493717
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACCGCG800.00266751721.8757
ATGCCGT3400.020.58823614
TGGGGTC6000.019.83333466
TACCGGC6450.019.53488552
ATACCGG6650.018.94736951
CCGGCAG6750.018.66666854
ACCGGCA7100.018.23943753
CGTATGC3650.018.21917711
GGCAGTA7550.017.61589456
CGGCAGT7600.017.555
GGGGTCT6300.017.22222167
CAAGGGC2259.404903E-817.111114
GTATGCC4150.016.8674712
GAGTCCT7700.016.81818238
CTCGTAT4700.016.3829789
TGTGCGG3651.8189894E-1216.30136910
TGAGTCC7750.016.25806637
AAGGGCC1957.838769E-616.1538475
CCTATAC3753.6379788E-1215.8666663
TACACCG3552.1827873E-1115.7746495
Produced by FastQC (version 0.11.2)