FastQCFastQC Report
Fri 12 Jun 2015
000000000-AFM8U l01n01 ve09.3410000000c78a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-AFM8U l01n01 ve09.3410000000c78a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1432747
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACTG2306.0827006E-918.2608685
CCGCTCC2601.4624675E-917.59
GTGTAGC3600.017.4999981
CGTACTA8250.016.12121270
CCCTGCG1554.0560175E-415.8064529
AGGGGTG2906.2245817E-915.6896555
TAGACCC1350.00294707915.5555554
TACTAGG1807.1528186E-515.5555542
GTAGCAC3905.456968E-1215.2564113
ACCGCTC3251.722583E-915.0769238
TACACTG4750.014.7368435
GTATTAG2858.540337E-814.7368411
TGTAGCA5500.014.6363642
ACTGTGC3604.656613E-1014.5833328
TATACTG6500.014.5384625
AGCACCG4202.1827873E-1114.1666665
GTCCAGA4202.1827873E-1114.1666661
TAGCGTG2253.0341129E-514.05
CGTACGT1500.00593617814.010
GGCTAGA1750.001018160814.01
Produced by FastQC (version 0.11.2)