##FastQC 0.11.2 >>Basic Statistics pass #Measure Value Filename 000000000-AFBVR l01n02.332000000094c8.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18239725 Sequences flagged as poor quality 0 Sequence length 12 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.092160600009045 33.0 32.0 34.0 18.0 35.0 2 31.354475190826616 33.0 32.0 34.0 18.0 35.0 3 31.533296527222863 33.0 32.0 34.0 29.0 35.0 4 31.686848239214132 33.0 32.0 34.0 29.0 35.0 5 31.32199739853534 33.0 32.0 34.0 18.0 35.0 6 33.64420390110048 37.0 33.0 37.0 20.0 37.0 7 33.36251730768967 35.0 33.0 37.0 29.0 37.0 8 32.81686028709314 34.0 33.0 37.0 19.0 37.0 9 33.36546291131034 37.0 33.0 37.0 18.0 37.0 10 33.14098195011164 35.0 33.0 37.0 19.0 37.0 11 33.023375571726 35.0 33.0 37.0 19.0 37.0 12 33.39458215515859 37.0 33.0 37.0 18.0 37.0 >>END_MODULE >>Per tile sequence quality warn #Tile Base Mean 1101 1 -0.17036480638731177 1101 2 -0.13654239163035697 1101 3 0.030207867969906488 1101 4 -0.052251156008463084 1101 5 0.07656267486575175 1101 6 0.07854597771676453 1101 7 0.06707947169975625 1101 8 0.3359515266748403 1101 9 0.3041138141549169 1101 10 0.11481126286768273 1101 11 0.16595893655949112 1101 12 0.1064129891724761 1102 1 0.4449823149566896 1102 2 0.38637119036836864 1102 3 0.29841732003043475 1102 4 0.29672144281464696 1102 5 0.48649584149570657 1102 6 0.3467019040970527 1102 7 0.38819703675519435 1102 8 0.5463556286964462 1102 9 0.571191340597828 1102 10 0.40896769705813796 1102 11 0.35159181044181764 1102 12 0.33771419379448275 1103 1 0.4064622229119408 1103 2 0.40245724451863296 1103 3 0.3575992714062757 1103 4 0.2627491677715774 1103 5 0.3958498942882258 1103 6 0.17001703402541324 1103 7 0.31606489233263346 1103 8 0.4670342371295817 1103 9 0.46199235034029584 1103 10 0.27913144344195473 1103 11 0.30972094754365287 1103 12 0.06616630847633331 2112 1 0.25470691848279614 2112 2 0.16303977083378385 2112 3 0.17796489227072954 2112 4 0.16673549895624973 2112 5 0.28614345232906047 2112 6 0.16111746189427123 2112 7 0.14375925022978464 2112 8 0.3997881334542157 2112 9 0.3838802717077101 2112 10 0.14294136881508734 2112 11 0.1851545075265406 2112 12 -0.08886734427520082 1113 1 0.29893433410310166 1113 2 0.08272435426498603 1113 3 0.05925798765702339 1113 4 0.06940442526278545 1113 5 0.197400514192708 1113 6 0.07281866900384415 1113 7 -0.06752338723883611 1113 8 0.23411309987025675 1113 9 0.34032742958597595 1113 10 0.025716715051757433 1113 11 0.10949480194236116 1113 12 4.1527614391867473E-4 2113 1 0.20627298523796256 2113 2 0.18351308817283396 2113 3 0.13142249875622625 2113 4 0.10064502754201143 2113 5 0.26524805269028917 2113 6 0.11665324776629404 2113 7 0.09998743556548817 2113 8 0.3012385737564429 2113 9 0.35923442849179565 2113 10 0.17141005649842356 2113 11 0.16609460638603935 2113 12 0.07728502439584162 1112 1 0.21652764044881323 1112 2 0.2169352981024879 1112 3 0.2134484515218702 1112 4 0.13680426000771106 1112 5 0.3908383919393934 1112 6 0.10200865531545134 1112 7 0.2113904018091759 1112 8 0.37939313264948993 1112 9 0.3815779649637179 1112 10 0.16906248603668672 1112 11 0.06254272114512105 1112 12 -0.0233629516707623 2114 1 0.415014780942883 2114 2 0.21356813553992993 2114 3 0.0867824895460707 2114 4 0.13233165127735447 2114 5 0.3226119869839472 2114 6 0.0023797708097674786 2114 7 0.17935111748189314 2114 8 0.4534704059810366 2114 9 0.44416839483384507 2114 10 0.24916887702880786 2114 11 0.24052890583610065 2114 12 0.10217474629259726 1114 1 0.2058054533088267 1114 2 0.10215329390791084 1114 3 0.21958777874437985 1114 4 0.18519206980960234 1114 5 0.16501898722436792 1114 6 0.10139024418404574 1114 7 0.03408991319275856 1114 8 0.35601288948429755 1114 9 0.3816320425344628 1114 10 0.17292350001702772 1114 11 0.08807700695535203 1114 12 0.06674406282547807 1109 1 0.28335444244803654 1109 2 0.17357494390365247 1109 3 0.08610214533479521 1109 4 0.09415147347186803 1109 5 0.3514634349100909 1109 6 0.11575950818781422 1109 7 0.06691623180747541 1109 8 0.30049309131833724 1109 9 0.2983607820472187 1109 10 0.19685952948819363 1109 11 0.18447617659218452 1109 12 0.19250795917064778 1108 1 0.39182184646175244 1108 2 0.28360300356170853 1108 3 0.3226309589697358 1108 4 0.20328074859564538 1108 5 0.30401144121576706 1108 6 0.2271061581991347 1108 7 0.27026396831718813 1108 8 0.3349615252675804 1108 9 0.4134889238607755 1108 10 0.20624183045042344 1108 11 0.10908007308420764 1108 12 0.1624346685620921 1111 1 0.14146663974036144 1111 2 0.06413407446173025 1111 3 0.07020438517589156 1111 4 -0.21646716369846786 1111 5 0.20279841958378952 1111 6 -0.08588382926559035 1111 7 0.08195914225900935 1111 8 0.3308013064761326 1111 9 0.3510223285656693 1111 10 0.15212641516067293 1111 11 0.04323646122495006 1111 12 -0.012302260822728783 1110 1 0.11431478065257039 1110 2 0.15805275815446507 1110 3 0.18129705118916561 1110 4 0.11358044972614678 1110 5 0.20859474618857377 1110 6 0.006507722402609772 1110 7 -0.5847554934734163 1110 8 0.0023499422097899014 1110 9 0.1996843104918824 1110 10 -0.1023019624958863 1110 11 0.017198723038177377 1110 12 0.03386525270963858 1105 1 -0.06469617649078785 1105 2 -0.026102775903453335 1105 3 0.07562028806879084 1105 4 0.02818111243840704 1105 5 0.04420033695894787 1105 6 -0.23606038138193242 1105 7 -0.06749287537063253 1105 8 0.18336537104259065 1105 9 0.2481996566930107 1105 10 -0.25804421253118903 1105 11 -0.03267245487887749 1105 12 0.023125660783733792 1104 1 -1.6629411147056778 1104 2 -1.1802558909300167 1104 3 -0.5767748376223913 1104 4 -0.4267545379189954 1104 5 -4.583138457829168 1104 6 -1.1567034198860355 1104 7 -0.7063640380645779 1104 8 -0.08739868099986836 1104 9 0.04016259587012172 1104 10 -0.17674019372774552 1104 11 -0.06028796736373465 1104 12 0.16618720810463117 1107 1 -0.1052583692158855 1107 2 -0.34499107647911487 1107 3 -0.25792707405554793 1107 4 -0.1741978674293918 1107 5 0.023202896886164837 1107 6 -0.45208048296101566 1107 7 -0.12062003333685567 1107 8 0.11301868990546637 1107 9 -6.148150913208678 1107 10 -1.149270222324791 1107 11 -0.4524679369638136 1107 12 -0.008576882282142151 1106 1 -0.18838127327560628 1106 2 -0.23680881575635127 1106 3 -1.0385257250380917 1106 4 -0.45336577806781975 1106 5 -0.046902148348198835 1106 6 0.13376718519920416 1106 7 -0.11047589914174694 1106 8 0.2176488385848927 1106 9 0.30710252861276643 1106 10 -0.3033717318471787 1106 11 -0.09160374661600201 1106 12 0.12712712937208437 2103 1 0.20678402135411034 2103 2 -0.0030847973676486617 2103 3 0.12465594202499375 2103 4 0.054469991693402164 2103 5 0.18073085282645351 2103 6 0.2460732668891481 2103 7 -0.1279561506781448 2103 8 0.25671151223662037 2103 9 0.2438020898624771 2103 10 0.10579748315957005 2103 11 0.09856486625015037 2103 12 0.1995240527069626 2102 1 -0.11720447988448512 2102 2 -0.3950128684270524 2102 3 -0.03492313024576532 2102 4 -0.04633875495451534 2102 5 0.18572678871361603 2102 6 0.13883971462404787 2102 7 -0.01896595699189163 2102 8 0.1564785904441166 2102 9 0.05334264668481836 2102 10 0.07593979208817103 2102 11 0.12741286720639522 2102 12 -0.22610603000027396 2101 1 -0.27290115876869336 2101 2 0.049093819317409526 2101 3 -0.15578766683354672 2101 4 -0.06077481330898493 2101 5 0.2172241310201315 2101 6 -0.004975176577701745 2101 7 0.1481977106000727 2101 8 0.14430528291836708 2101 9 0.23593633950191162 2101 10 0.13633814029916635 2101 11 -0.7463039804411551 2101 12 -0.28038966354515793 2107 1 0.020489486473522334 2107 2 0.24744488225345762 2107 3 0.1195634878225178 2107 4 0.15215246215131728 2107 5 0.22143236077217665 2107 6 0.24720322856262555 2107 7 0.26594390208721563 2107 8 0.4143644699184037 2107 9 0.44606607861591385 2107 10 0.21983608912799468 2107 11 -0.04154325796172742 2107 12 0.16071368271266095 2106 1 0.06375221193638225 2106 2 0.009453143457665902 2106 3 -0.027020994285425814 2106 4 -0.041289850683877916 2106 5 0.1552518731784467 2106 6 0.0010760516493917294 2106 7 0.09871248173639913 2106 8 0.2991678675804792 2106 9 0.17137055134679002 2106 10 -0.01879837790094996 2106 11 0.12526971960837585 2106 12 -0.27035181926859764 2105 1 0.2341462352124104 2105 2 0.13693244862740173 2105 3 0.16468859605590325 2105 4 0.08333621456733553 2105 5 0.22210322103521918 2105 6 0.2356883326150907 2105 7 0.2448146142731744 2105 8 -6.413993144664435 2105 9 -1.0132190419682203 2105 10 -0.5304547615845294 2105 11 -0.24040383736987536 2105 12 -0.06807102777065666 2104 1 -0.018992449271379996 2104 2 0.07673661546267496 2104 3 0.044754220937516465 2104 4 0.03075064304495001 2104 5 0.018939853580793198 2104 6 -0.008703689119919034 2104 7 0.05335735167250988 2104 8 0.24521587113638077 2104 9 0.13880465133244257 2104 10 0.1320776803049597 2104 11 -0.05990106591683997 2104 12 -0.05244364046413352 2111 1 -0.37957080326210146 2111 2 -0.22518541365023026 2111 3 -0.002508237892584475 2111 4 -0.11996947021942361 2111 5 -0.04124899347176836 2111 6 -0.02509358341350776 2111 7 -0.10346005427303595 2111 8 0.16275933120989095 2111 9 0.17289412950870542 2111 10 -0.05470044098187543 2111 11 -0.15301821781100955 2111 12 -0.3177628114199891 2110 1 -0.2317034274867673 2110 2 -0.10312517876733551 2110 3 -0.1327651531590739 2110 4 -0.09062092719689474 2110 5 -0.0034456385056813588 2110 6 -0.004581577112517721 2110 7 -0.47550960979840795 2110 8 -0.16745778744820683 2110 9 0.011971950125179376 2110 10 -0.17320746777176765 2110 11 -0.20569876847481794 2110 12 -0.43313792046240707 2109 1 -0.45675366727838806 2109 2 -0.2147298728304392 2109 3 -0.11608501980665764 2109 4 -0.1796339059594878 2109 5 -0.09986479089952027 2109 6 -0.22408812432582437 2109 7 -0.1426143583164574 2109 8 0.06299990117565102 2109 9 0.11995331588874336 2109 10 -0.10424860123848134 2109 11 -0.16185453770738434 2109 12 -0.15729030733338334 2108 1 -0.2360685886452103 2108 2 -0.08394898316723243 2108 3 -0.42188779454328085 2108 4 -0.2488224136848025 2108 5 -0.1472501238252022 2108 6 -0.3054838690980475 2108 7 -0.14434706513558382 2108 8 -0.029149606008786577 2108 9 0.08108903895807629 2108 10 -0.08821239449033413 2108 11 -0.13864735983577248 2108 12 0.11626444409178305 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 23.0 15 2254.0 16 63707.0 17 151978.0 18 203613.0 19 269318.0 20 249567.0 21 271468.0 22 274581.0 23 255391.0 24 249809.0 25 241948.0 26 238293.0 27 244692.0 28 271241.0 29 302862.0 30 390878.0 31 521162.0 32 971863.0 33 2170699.0 34 4896179.0 35 5273578.0 36 724621.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.311394497449935 21.395854378286952 41.263012463181326 19.029738661081787 2 31.963149878975685 18.2969445314493 18.773278519635415 30.966627069939605 3 5.135115798072613 42.04828197793552 13.615868660300526 39.20073356369134 4 45.9231236174407 17.80259394275922 25.891307346536603 10.382975093263473 5 19.93172703709771 33.92605611795442 21.224438483827935 24.91777836111994 6 25.006994348873135 32.79749009373771 13.135993004280492 29.059522553108668 7 17.66847362007925 28.02060338080755 15.02306092882431 39.28786207028889 8 5.56447016413187 24.41816005549207 19.72657042398229 50.29079935639377 9 12.35040001973714 35.76336814288592 31.229675886012537 20.656555951364396 10 32.90244233397159 25.181733825482567 17.40584904651797 24.50997479402787 11 19.733866601607204 9.96775444805226 24.568369314778597 45.73000963556194 12 9.272179268053659 37.96328617893088 31.928107468725543 20.836427084289923 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 694.0 1 694.0 2 694.0 3 694.0 4 2366.5 5 4039.0 6 4039.0 7 4039.0 8 4039.0 9 4039.0 10 4039.0 11 4039.0 12 4039.0 13 10657.5 14 17276.0 15 17276.0 16 17276.0 17 17276.0 18 17276.0 19 17276.0 20 17276.0 21 38607.0 22 59938.0 23 59938.0 24 59938.0 25 59938.0 26 59938.0 27 59938.0 28 59938.0 29 148141.0 30 236344.0 31 236344.0 32 236344.0 33 236344.0 34 236344.0 35 236344.0 36 236344.0 37 236344.0 38 2474140.5 39 4711937.0 40 4711937.0 41 4711937.0 42 4711937.0 43 4711937.0 44 4711937.0 45 4711937.0 46 6531045.0 47 8350153.0 48 8350153.0 49 8350153.0 50 8350153.0 51 8350153.0 52 8350153.0 53 8350153.0 54 6469876.0 55 4589599.0 56 4589599.0 57 4589599.0 58 4589599.0 59 4589599.0 60 4589599.0 61 4589599.0 62 4589599.0 63 2398411.5 64 207224.0 65 207224.0 66 207224.0 67 207224.0 68 207224.0 69 207224.0 70 207224.0 71 128176.0 72 49128.0 73 49128.0 74 49128.0 75 49128.0 76 49128.0 77 49128.0 78 49128.0 79 29908.0 80 10688.0 81 10688.0 82 10688.0 83 10688.0 84 10688.0 85 10688.0 86 10688.0 87 10688.0 88 6329.5 89 1971.0 90 1971.0 91 1971.0 92 1971.0 93 1971.0 94 1971.0 95 1971.0 96 1352.5 97 734.0 98 734.0 99 734.0 100 734.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 1.096507759848353E-5 3 0.0 4 5.482538799241765E-6 5 5.482538799241765E-6 6 0.0 7 0.0 8 5.482538799241765E-6 9 0.0 10 0.0 11 0.0 12 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 12 1.8239725E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 2.3498711255848828 #Duplication Level Percentage of deduplicated Percentage of total 1 71.01191409340333 1.668688465006027 2 11.225251837751673 0.5275579034190259 3 4.705847365113602 0.33174404534070456 4 2.7675720202087413 0.2601375031306057 5 1.7699733777095037 0.2079604666666754 6 1.250658477225291 0.17633317461598022 7 0.930607644324259 0.15307656228522998 8 0.634043873574369 0.11919371126931212 9 0.4838378284856836 0.10232608883617789 >10 4.258302716025629 1.9919743057364145 >50 0.48228471577161597 0.7869647119910591 >100 0.35252911923772295 1.7192460295378476 >500 0.05876295931456861 0.9780502352216576 >1k 0.05914096039426796 2.8148283065876196 >5k 0.003709204583902785 0.5789704464586191 >10k+ 0.005563806875854088 87.58294804389708 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGAGAACCTCCA 2365886 12.971061789582903 No Hit TCCGACACAATT 1487514 8.155353219415314 No Hit CCAGTGTATGCA 1050025 5.7568028026738345 No Hit TAATGACCACGC 995927 5.460208418712453 No Hit ATTTCGACATGC 946005 5.186509116776706 No Hit CTAACCTCCGCT 903625 4.95415912246484 No Hit ACCGTGCATAGG 830443 4.552935968058729 No Hit AGCAGTCGCGAT 830191 4.55155436828132 No Hit AGTTCAGACGCT 783467 4.2953882254255475 No Hit GCGGATGTGACT 767801 4.209498772596627 No Hit TGCCTACAAGCA 738944 4.051289150466906 No Hit CACGCCATAATG 669860 3.6725334400600884 No Hit GTATGCGCTGTA 655430 3.5934204051870298 No Hit GACTTGGTATTC 653737 3.5841384669999137 No Hit TACACGATCTAC 605388 3.3190631985953734 No Hit GGAGACAAGGGA 471518 2.5851157295408784 No Hit GCACACACGTTA 438620 2.404751168123423 No Hit TTCAGACTACCA 424873 2.3293827072502467 No Hit CCTCGTTCGACT 345491 1.8941678122888366 No Hit TGAAAACCTCCA 46610 0.25554113343265866 No Hit TGAGAACCTCAA 33195 0.18199287544083037 No Hit >>END_MODULE >>Adapter Content warn >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAGTGC 345 0.0 6.0000005 1 AGGGTAT 450 0.0 6.0000005 3 AGAACCG 305 0.0 6.0000005 3 CGTACGC 205 0.0 6.0000005 5 CCGACCA 205 0.0 6.0000005 2 GTACGCA 395 0.0 6.0000005 6 GCATAAG 115 6.8277586E-8 6.0 6 AGCCGTC 120 2.5696863E-8 6.0 1 CAGAAAC 115 6.8277586E-8 6.0 2 GAGTGCA 55 0.009160909 6.0 2 GACAGGG 70 4.6975462E-4 6.0 4 GTCGCTA 190 0.0 6.0 5 GACAGAA 135 1.375156E-9 6.0 4 GTCGCGT 165 3.6379788E-12 6.0 5 ACAGTGT 190 0.0 6.0 1 AGTCCGA 80 6.539671E-5 6.0 4 CCGGGCA 310 0.0 6.0 2 GATAACC 655 0.0 6.0 2 GTCGAGA 355 0.0 6.0 5 AGTCAGA 125 9.677024E-9 6.0 1 >>END_MODULE