##FastQC 0.11.2 >>Basic Statistics pass #Measure Value Filename 000000000-AF4P8 l01n02.33200000008afc.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15963168 Sequences flagged as poor quality 0 Sequence length 12 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.880032960875937 33.0 32.0 34.0 16.0 34.0 2 30.920516904915115 33.0 32.0 34.0 16.0 34.0 3 31.09391713474418 33.0 32.0 34.0 16.0 34.0 4 31.13597438804127 33.0 32.0 34.0 16.0 35.0 5 31.147035350376566 33.0 32.0 34.0 16.0 35.0 6 33.68820274271373 37.0 34.0 37.0 18.0 37.0 7 33.271642007401034 37.0 33.0 37.0 18.0 37.0 8 33.44854166791955 37.0 33.0 37.0 18.0 37.0 9 33.20618432381342 37.0 33.0 37.0 18.0 37.0 10 33.51526814727503 37.0 34.0 37.0 18.0 37.0 11 32.892427117223846 35.0 33.0 37.0 18.0 37.0 12 32.94163971712883 37.0 33.0 37.0 18.0 37.0 >>END_MODULE >>Per tile sequence quality pass #Tile Base Mean 1101 1 0.08259669739615205 1101 2 0.23712077970960266 1101 3 0.19139525898624754 1101 4 0.18816883925299166 1101 5 0.21143228491440524 1101 6 0.11009036940720307 1101 7 0.21142722808501446 1101 8 0.24865602260478425 1101 9 0.1915968441987843 1101 10 0.20384984622270963 1101 11 0.2164016983662691 1101 12 0.21602312024587889 1102 1 0.07728850639271556 1102 2 0.20830913130247097 1102 3 0.18216552646415707 1102 4 0.19250166273191383 1102 5 0.20461822045673372 1102 6 0.18454697447963753 1102 7 0.2312924911256502 1102 8 0.16738327468108594 1102 9 0.12216574709218975 1102 10 0.17346835863946808 1102 11 0.1896800279678459 1102 12 0.25077062443664744 1103 1 0.041190744731547824 1103 2 0.09747393689114148 1103 3 0.06579553728154153 1103 4 0.08099621280495839 1103 5 0.07044625640103064 1103 6 -0.002657926475393424 1103 7 0.07620136010019962 1103 8 0.032237651092067665 1103 9 0.03504426549381634 1103 10 0.06252807165786578 1103 11 0.10588514747845323 1103 12 0.021349465860438954 2112 1 0.05397314338161863 2112 2 0.1002987343691828 2112 3 0.05804620925551518 2112 4 0.03873702535389256 2112 5 0.07007575822949619 2112 6 0.026441733192733352 2112 7 0.08438690412126704 2112 8 0.10312816320735863 2112 9 0.09249630345431115 2112 10 0.05251206288963317 2112 11 0.09269913097322302 2112 12 0.03754277442310183 1113 1 0.06585391504412286 1113 2 -0.03107394381170181 1113 3 0.004280761010786449 1113 4 0.056736829833468505 1113 5 0.02336864036213626 1113 6 -0.09953976979194579 1113 7 0.014055047710236579 1113 8 0.09474243720895714 1113 9 0.013041430618201844 1113 10 -0.004692014058441885 1113 11 0.09105416973452662 1113 12 0.13583512443942425 2113 1 0.07738266237241476 2113 2 0.08442423091382878 2113 3 -0.011158566479977594 2113 4 0.06572090701208921 2113 5 0.082256317794279 2113 6 -0.14474450940183914 2113 7 0.06824200945480641 2113 8 0.11793746682380402 2113 9 0.025823388016554816 2113 10 0.051863629575493064 2113 11 0.059049585911360225 2113 12 0.18146805149128653 1112 1 0.141150041842117 1112 2 0.14093851752357622 1112 3 0.14753524478729574 1112 4 0.10498394839136083 1112 5 0.08621449547274906 1112 6 0.1303070387064622 1112 7 0.17530947939221164 1112 8 0.15655343240522512 1112 9 0.04835085023781005 1112 10 0.13209412103136486 1112 11 0.05912141013592276 1112 12 0.20935554710861481 2114 1 0.05946761483665597 2114 2 0.1062759769772974 2114 3 0.04746903496987542 2114 4 0.03707453743481537 2114 5 0.07725305577369213 2114 6 0.12877151005405807 2114 7 0.1362325236308095 2114 8 0.12228337579301751 2114 9 0.14279508946416541 2114 10 0.13557266468007612 2114 11 0.08418637494722248 2114 12 0.16150455430961586 1114 1 0.08046650347383277 1114 2 0.07424136065687748 1114 3 0.06451289356715151 1114 4 0.11865219933868687 1114 5 0.08776028388919244 1114 6 0.10064489502376972 1114 7 0.10743732089838431 1114 8 0.13322925813902486 1114 9 0.13239101140782594 1114 10 0.1344013699774962 1114 11 0.08741732770215549 1114 12 0.1544411701462849 1109 1 0.14589408125250003 1109 2 0.12150332465202851 1109 3 0.14454760581346804 1109 4 0.15611040750892613 1109 5 0.16164020644676924 1109 6 0.16363273360421715 1109 7 0.11909827063399092 1109 8 0.19350692614652587 1109 9 0.2086935678542332 1109 10 0.1995132391881569 1109 11 0.16246344593301387 1109 12 0.3196564887650837 1108 1 0.19026863021717233 1108 2 0.22435261532097428 1108 3 0.1843523993447782 1108 4 0.22863261821225223 1108 5 0.17945101612660963 1108 6 0.21622682699752716 1108 7 0.21995368164745344 1108 8 0.23347801198089257 1108 9 0.2386334609335421 1108 10 0.22483109189550277 1108 11 0.13077878806882381 1108 12 0.1884682102740527 1111 1 0.2164196385300201 1111 2 0.2165225352027491 1111 3 0.22289080828596752 1111 4 0.24757569559987758 1111 5 0.1049593728794278 1111 6 0.19609884273498324 1111 7 0.17679207363022442 1111 8 0.1922080772375523 1111 9 0.2149440333717081 1111 10 0.24672007736559465 1111 11 0.1613707914119047 1111 12 0.22788969309309692 1110 1 0.21457061633418917 1110 2 0.2257303230685892 1110 3 0.22235571662510267 1110 4 0.18138997211200092 1110 5 0.20520112256179246 1110 6 0.18412783628059515 1110 7 0.12102003332537947 1110 8 0.169430690996208 1110 9 0.1405832084756895 1110 10 0.20462236843913928 1110 11 0.05999581828544365 1110 12 0.22560780838994532 1105 1 0.2343454763862134 1105 2 0.2521140733310574 1105 3 0.2085896554828892 1105 4 0.17413065638519853 1105 5 0.1983424162562848 1105 6 0.17990233150309365 1105 7 0.13953690008741404 1105 8 0.28461761349040415 1105 9 0.17976505548846688 1105 10 0.24960848114625378 1105 11 0.24289841674617918 1105 12 0.30919481903220003 1104 1 -0.01159624622523836 1104 2 0.007224410292000272 1104 3 -0.02021460157384425 1104 4 -0.004817576891092301 1104 5 0.006748414770047617 1104 6 -0.028110665097877074 1104 7 0.03153760185438159 1104 8 0.06520152367404819 1104 9 0.005344444062728826 1104 10 -0.026098969361740387 1104 11 -0.02082463947558466 1104 12 0.10474111171472344 1107 1 -0.13945626172359127 1107 2 -0.10451121784348416 1107 3 -0.1349913871492454 1107 4 -0.07655514302359379 1107 5 -0.10924920170442576 1107 6 -0.10483547779223557 1107 7 -0.11341836473934563 1107 8 -0.16310949668433494 1107 9 -0.09724265577747815 1107 10 -0.08322091969089485 1107 11 -0.09413259858755652 1107 12 0.008579519497075694 1106 1 -0.1250303171296956 1106 2 -0.10195027794918943 1106 3 -0.15020861481271552 1106 4 -0.15912023102935535 1106 5 -0.12997964388639716 1106 6 -0.09275580338856315 1106 7 -0.1450452393299031 1106 8 -0.1286072538718912 1106 9 -0.1576065191923277 1106 10 -0.19778672650583218 1106 11 -0.08796104771248991 1106 12 -0.054946747404038376 2103 1 -0.1213064799827741 2103 2 -0.11035580655548927 2103 3 -0.1479445407024471 2103 4 -0.1062760780606169 2103 5 -0.10098381414195501 2103 6 -0.05147616205578487 2103 7 -0.028617512918884813 2103 8 -0.022549663812725385 2103 9 -0.11167630865300282 2103 10 -0.05670781443335926 2103 11 -0.0544229623511967 2103 12 -0.027567974905132075 2102 1 -0.2700014922099143 2102 2 -0.31906655710371723 2102 3 -0.2374079396471238 2102 4 -0.21911088556580083 2102 5 -0.25464596412664875 2102 6 -0.14552125885437306 2102 7 -0.17679521630894612 2102 8 -0.18064066959604475 2102 9 -0.23955370621791872 2102 10 -0.1918155784677822 2102 11 -0.17845839544018816 2102 12 -0.3210637404932015 2101 1 -0.22377025642068205 2101 2 -0.24860278314632112 2101 3 -0.27638310861012627 2101 4 -0.2618314578222858 2101 5 -0.23501606835560196 2101 6 -0.19840155992223174 2101 7 -0.22715887601228246 2101 8 -0.2850012816890839 2101 9 -0.2944674692013294 2101 10 -0.2866616352066558 2101 11 -0.2518049965134139 2101 12 -0.31928701351719013 2107 1 -0.22938187582929714 2107 2 -0.2677928718002711 2107 3 -0.21099233837512443 2107 4 -0.29496763792960223 2107 5 -0.22986653873185858 2107 6 -0.14842308988924913 2107 7 -0.2224777428739273 2107 8 -0.32621920142977956 2107 9 -0.3350249013518791 2107 10 -0.2886998568368 2107 11 -0.215263739678754 2107 12 -0.4956756806692795 2106 1 -0.20926742134280119 2106 2 -0.25676206492338594 2106 3 -0.17489560022650963 2106 4 -0.25171310718412343 2106 5 -0.2606073173596961 2106 6 -0.15438370769074794 2106 7 -0.24046524485085996 2106 8 -0.32293348704832425 2106 9 -0.2366117359684381 2106 10 -0.24157211682184254 2106 11 -0.12617360674853018 2106 12 -0.5689066293463583 2105 1 -0.08616660962944067 2105 2 -0.13558188185904996 2105 3 -0.13815525355563807 2105 4 -0.10297163586576374 2105 5 -0.13252925008139016 2105 6 -0.07099500090892263 2105 7 -0.1670790565860898 2105 8 -0.19193801439314484 2105 9 -0.12175961460280149 2105 10 -0.17029267617188992 2105 11 -0.03524906149456086 2105 12 -0.21888333456804787 2104 1 -0.16832641314000796 2104 2 -0.1693887587016114 2104 3 -0.07996256349355235 2104 4 -0.12811629432309246 2104 5 -0.17512851717593136 2104 6 -0.09642968228305904 2104 7 -0.19571497912209423 2104 8 -0.17486886851938976 2104 9 -0.17250060976009252 2104 10 -0.395185681394544 2104 11 -0.1680403579173344 2104 12 -0.28745005021637837 2111 1 -0.05546793701691044 2111 2 -0.1523409832758702 2111 3 -0.12822060675814484 2111 4 -0.051049721506711165 2111 5 -0.056594928922184096 2111 6 -0.06427807206090108 2111 7 -0.09105866137901586 2111 8 -0.18386016356966906 2111 9 -0.06554296924529979 2111 10 -0.032950652784045076 2111 11 -0.0839094515806238 2111 12 -0.16691712130192826 2110 1 0.04089055713869172 2110 2 -0.003077394600428107 2110 3 0.008539041274755022 2110 4 -0.06040904077370968 2110 5 0.0214554656081134 2110 6 -0.03322178305967327 2110 7 -0.161137937249606 2110 8 -0.29746218351510834 2110 9 -0.01029732084348467 2110 10 -0.06108292589557607 2110 11 -0.16007501575987249 2110 12 -0.12228337726664051 2109 1 -0.08273300752034274 2109 2 -0.14195844375088384 2109 3 -0.08315482292522347 2109 4 -0.11775000330671048 2109 5 -0.05540284170808718 2109 6 -0.10846125213524971 2109 7 -0.14446380131092695 2109 8 -0.04065824057866507 2109 9 0.029908113409355508 2109 10 -0.12128082166973542 2109 11 -0.2220099711530068 2109 12 -0.0830868710278807 2108 1 7.454888405789006E-4 2108 2 -0.05406696488996943 2108 3 0.04121425115997468 2108 4 -0.036722698689910516 2108 5 -0.05121924174856929 2108 6 -0.0765553711761271 2108 7 9.097069847072703E-4 2108 8 0.0032545992275103686 2108 9 0.020706997234633207 2108 10 0.08646300659047057 2108 11 -0.04467628924903977 2108 12 -0.08635954251128197 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 38.0 15 3618.0 16 152209.0 17 280093.0 18 281377.0 19 285115.0 20 230002.0 21 232479.0 22 218851.0 23 197256.0 24 202043.0 25 196955.0 26 188697.0 27 192742.0 28 202364.0 29 223173.0 30 260598.0 31 350748.0 32 582911.0 33 1373079.0 34 3747088.0 35 6032297.0 36 529435.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 14.206628659173418 25.03977280700172 41.83013046031965 18.92346807350521 2 30.498922926760088 39.226771229042456 1.9597740222851767 28.314531821912283 3 15.887404054132615 21.23237066727607 46.48094288051093 16.39928239808038 4 13.803124793274115 12.984615585076847 31.36242129381837 41.84983832783067 5 12.128244218190273 57.047918057368065 17.597528260054645 13.226309464387018 6 32.47932991747002 20.675012629072125 22.202096726664784 24.64356072679308 7 47.424189233615785 20.990607879338235 25.338541823277183 6.246661063768796 8 24.374104461852713 9.598189381843842 27.680710224982295 38.346995931321146 9 14.830821801787716 32.79687340257272 40.16153936361504 12.21076543202452 10 24.050533077143584 18.410474662673472 31.570963858802966 25.96802840137998 11 33.96996761545077 13.832592628230186 16.295925721009766 35.90151403530928 12 10.960656431104402 30.87057030283713 29.581233499515886 28.58753976654258 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7300.0 1 7300.0 2 7300.0 3 7300.0 4 21838.0 5 36376.0 6 36376.0 7 36376.0 8 36376.0 9 36376.0 10 36376.0 11 36376.0 12 36376.0 13 67769.5 14 99163.0 15 99163.0 16 99163.0 17 99163.0 18 99163.0 19 99163.0 20 99163.0 21 147495.0 22 195827.0 23 195827.0 24 195827.0 25 195827.0 26 195827.0 27 195827.0 28 195827.0 29 310492.5 30 425158.0 31 425158.0 32 425158.0 33 425158.0 34 425158.0 35 425158.0 36 425158.0 37 425158.0 38 3558999.0 39 6692840.0 40 6692840.0 41 6692840.0 42 6692840.0 43 6692840.0 44 6692840.0 45 6692840.0 46 6121004.5 47 5549169.0 48 5549169.0 49 5549169.0 50 5549169.0 51 5549169.0 52 5549169.0 53 5549169.0 54 4168737.0 55 2788305.0 56 2788305.0 57 2788305.0 58 2788305.0 59 2788305.0 60 2788305.0 61 2788305.0 62 2788305.0 63 1453989.5 64 119674.0 65 119674.0 66 119674.0 67 119674.0 68 119674.0 69 119674.0 70 119674.0 71 75720.5 72 31767.0 73 31767.0 74 31767.0 75 31767.0 76 31767.0 77 31767.0 78 31767.0 79 21489.5 80 11212.0 81 11212.0 82 11212.0 83 11212.0 84 11212.0 85 11212.0 86 11212.0 87 11212.0 88 7157.5 89 3103.0 90 3103.0 91 3103.0 92 3103.0 93 3103.0 94 3103.0 95 3103.0 96 3188.5 97 3274.0 98 3274.0 99 3274.0 100 3274.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 6.264420696443212E-6 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 6.264420696443212E-6 9 0.0 10 0.0 11 0.0 12 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 12 1.5963168E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 4.63684004271392 #Duplication Level Percentage of deduplicated Percentage of total 1 77.10447799656343 3.5752113104701957 2 12.047700831457798 1.117265232758826 3 3.6050254757208426 0.501477794424786 4 1.898730963021733 0.3521644703871974 5 1.1696616942722897 0.2711767090215179 6 0.6268465434576755 0.17439522920048167 7 0.48318521059784797 0.15683167727830816 8 0.37867419942163866 0.1404681352816712 9 0.3219559796536022 0.13435725406041096 >10 1.9480913083678928 1.7473940586740524 >50 0.191319645874774 0.6202769923315886 >100 0.14073835013859734 1.3712973858150788 >500 0.04123202773912775 1.347985831282704 >1k 0.03936723726695234 3.3186575320431717 >5k 4.0807315171139714E-4 0.11699917401807247 >10k+ 0.0025844632941680805 85.05404121295197 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATCAGTCTCGT 1093525 6.850300642078063 No Hit CAACACGCACGA 854938 5.355691301375767 No Hit AATCTTGCTGCA 809647 5.071969423613157 No Hit CCTCTCGTGATC 808464 5.0645586139292655 No Hit GGTCACTGACAG 796531 4.989805281758608 No Hit AATGGAGCATGA 775243 4.856448293972726 No Hit TATCAGGTGTGC 774971 4.854744371543292 No Hit TGGCAAGACTCT 764969 4.7920876357374675 No Hit TGTAATTGTCGC 719048 4.504419172936099 No Hit AGCTTGACAGCT 715236 4.480539201241257 No Hit TCGTCGATAATC 706276 4.4244099918011255 No Hit TGCAATGTTGCT 696152 4.360988996670335 No Hit TAATCCACAGCG 692967 4.341036816752164 No Hit TCGGAGTGTTGT 677139 4.241883565968861 No Hit GCCTGAATTTAC 661541 4.144171131945739 No Hit CCATAGGGTTCA 638718 4.001198258390816 No Hit TGTTATCGCACA 618453 3.8742497729773935 No Hit GAAGAAGCGGTA 460962 2.887659893073856 No Hit CCATGCGATAAC 220379 1.3805467686614588 No Hit >>END_MODULE >>Adapter Content warn >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTCG 320 0.0 6.0000005 5 CGGCGAG 80 6.5394204E-5 6.0000005 2 GGAGCTT 80 6.5394204E-5 6.0000005 4 GAAGCCG 80 6.5394204E-5 6.0000005 4 TACCAGG 80 6.5394204E-5 6.0000005 1 GCAGTCG 395 0.0 6.0000005 2 CACGCCG 80 6.5394204E-5 6.0000005 4 CAACCCG 335 0.0 6.0000005 1 CACGACT 205 0.0 6.0000005 4 TCGGAGC 160 1.0913936E-11 6.0000005 1 TGCTGGA 80 6.5394204E-5 6.0000005 6 CAAGGCG 205 0.0 6.0000005 6 GACGGCT 80 6.5394204E-5 6.0000005 6 AGGTGCG 395 0.0 6.0000005 5 AAGCTCT 80 6.5394204E-5 6.0000005 5 TCACGGG 65 0.0012619761 6.0 3 TCGCCGG 75 1.751374E-4 6.0 1 GTGTTCC 55 0.0091607375 6.0 6 GTCATGC 55 0.0091607375 6.0 2 CTTCGGT 55 0.0091607375 6.0 2 >>END_MODULE