##FastQC 0.11.2 >>Basic Statistics pass #Measure Value Filename 000000000-AE2TW l01n02.33200000008a68.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 16299268 Sequences flagged as poor quality 0 Sequence length 12 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.353132238822013 33.0 32.0 34.0 16.0 34.0 2 30.613643876522552 33.0 32.0 34.0 16.0 34.0 3 30.768461687972735 33.0 32.0 34.0 16.0 35.0 4 30.754263381643888 33.0 32.0 34.0 16.0 35.0 5 30.68701312230709 33.0 32.0 34.0 16.0 35.0 6 33.297254146627935 37.0 33.0 37.0 18.0 37.0 7 32.74434422453818 36.0 32.0 37.0 16.0 37.0 8 32.520964561107895 34.0 32.0 37.0 16.0 37.0 9 33.15105641553964 37.0 33.0 37.0 18.0 37.0 10 32.79287701754459 35.0 33.0 37.0 18.0 37.0 11 32.64331477953488 35.0 33.0 37.0 18.0 37.0 12 32.15358106879401 34.0 32.0 37.0 16.0 37.0 >>END_MODULE >>Per tile sequence quality pass #Tile Base Mean 1101 1 -0.28022014826720465 1101 2 -0.0214973842424655 1101 3 0.12263923789052811 1101 4 0.21686873705063192 1101 5 0.2638133284166422 1101 6 0.32406998316554336 1101 7 0.4158511461320771 1101 8 0.3343933889972064 1101 9 0.29251561990814423 1101 10 0.43913037180218595 1101 11 0.36161019900072233 1101 12 0.5088716276278333 1102 1 0.35250483327953575 1102 2 0.32995748323955 1102 3 0.34435259588227396 1102 4 0.31910202462432125 1102 5 0.3967610051386572 1102 6 0.3261546559322923 1102 7 0.4719341758490927 1102 8 0.37020363868429484 1102 9 0.34214222770712865 1102 10 0.4769078630913839 1102 11 0.38968832113609153 1102 12 0.3452195939408753 1103 1 0.35460832276429954 1103 2 0.3363931967390137 1103 3 0.42468261035551436 1103 4 0.3496757986724077 1103 5 0.24630452297520478 1103 6 0.37528565647554757 1103 7 0.39553557997406585 1103 8 0.389634401850671 1103 9 0.4020747616769569 1103 10 0.3483413733374192 1103 11 0.3849633341085621 1103 12 0.5557044805356668 2112 1 0.2842414959503685 2112 2 0.36825954776754344 2112 3 0.30750840776770616 2112 4 0.3407809920541851 2112 5 0.44983408459432184 2112 6 0.40746312133462936 2112 7 0.3977300574921685 2112 8 0.3803959651572626 2112 9 0.4171905689344655 2112 10 0.2877481876771526 2112 11 0.3964650412713411 2112 12 0.6371024300657453 1113 1 0.17560944312975124 1113 2 0.2734174907524185 1113 3 0.32830190281095284 1113 4 0.4073703440206309 1113 5 0.2923675891541855 1113 6 0.44035884764466005 1113 7 0.5003587529992686 1113 8 0.26223856107737475 1113 9 0.3633310148417692 1113 10 0.381101259381488 1113 11 0.4435041096577308 1113 12 0.6487819376828909 2113 1 0.1892345931061108 2113 2 0.2109261433403944 2113 3 0.3371873433162449 2113 4 0.2555538409885365 2113 5 0.27657611140877236 2113 6 0.38775650205072765 2113 7 0.17875359699194604 2113 8 0.16238009662405517 2113 9 0.2808858231833753 2113 10 0.2746733780146826 2113 11 -0.056861587325009566 2113 12 0.48157854240296416 1112 1 0.2767461542191505 1112 2 0.216035917106435 1112 3 0.1041657186956435 1112 4 0.16682128674586494 1112 5 0.10247220148744418 1112 6 0.19021707534746213 1112 7 0.01634584545171691 1112 8 0.02178521668525235 1112 9 0.12467199548095209 1112 10 0.26808885268763305 1112 11 -0.2558227122869283 1112 12 0.26408038389357813 2114 1 0.2659974754125294 2114 2 0.24256410192572275 2114 3 0.28101238468343936 2114 4 0.14214574563961335 2114 5 0.17829698241838798 2114 6 0.23116826949819114 2114 7 0.24948828881357343 2114 8 0.23903938001337366 2114 9 0.1984561488639187 2114 10 0.4316296599230043 2114 11 0.08172533647250191 2114 12 0.4933783324116163 1114 1 0.34069666799825526 1114 2 -0.018687078914730648 1114 3 0.08621823966453945 1114 4 0.1841062170054002 1114 5 0.24309819640421537 1114 6 0.2752756271864527 1114 7 0.31094032944617567 1114 8 0.28374519582798996 1114 9 0.2817250791393846 1114 10 0.42714023019879477 1114 11 0.23247239343227477 1114 12 0.2750884802154303 1109 1 0.21627828266999316 1109 2 0.1506271263251513 1109 3 0.13616685856593236 1109 4 0.12484116873937978 1109 5 0.13696005433133607 1109 6 0.1533153791569788 1109 7 0.10330634943779415 1109 8 0.10103574546702276 1109 9 0.1169496943257684 1109 10 0.3439255385747657 1109 11 0.2138960176030409 1109 12 0.07395522395529497 1108 1 0.20951215661022005 1108 2 0.013152618701585794 1108 3 -0.06567920758651624 1108 4 -0.09906578413643885 1108 5 0.003991524181611084 1108 6 -0.14705212208333762 1108 7 -0.25059731595231227 1108 8 -0.1949084089057962 1108 9 -0.11518243400504247 1108 10 -0.0802964788532492 1108 11 -0.06548119021503851 1108 12 -0.3427293177170121 1111 1 0.5298736408792131 1111 2 0.5008768757702349 1111 3 0.4612518587922736 1111 4 0.5031132236598452 1111 5 0.26246913364342106 1111 6 0.361405815785524 1111 7 0.44163877574619903 1111 8 0.4834227020007589 1111 9 0.41507597585969336 1111 10 0.4964517426628561 1111 11 0.4360436975191462 1111 12 0.4723725551225968 1110 1 -0.02364243763157603 1110 2 -0.08960115110143008 1110 3 -0.07264428417684954 1110 4 -0.13019587245924313 1110 5 -0.21567809100362823 1110 6 -0.15855549090809973 1110 7 -0.1713098472846255 1110 8 -0.18620089760360514 1110 9 -0.22720310181667003 1110 10 -0.08644701324448789 1110 11 -0.05436203985795629 1110 12 -0.022384424403007586 1105 1 0.27109035251772085 1105 2 0.21549841853459029 1105 3 0.22116376265923776 1105 4 0.16277171501467436 1105 5 -0.006696588613028354 1105 6 0.025990663525377045 1105 7 0.03871459948182121 1105 8 0.04382644672101321 1105 9 0.1153002294573966 1105 10 0.020402010419765304 1105 11 0.2722557766785201 1105 12 0.1132454457224128 1104 1 -1.382627496785073 1104 2 -0.6105047745595655 1104 3 -0.742772346466392 1104 4 -0.3829599280298055 1104 5 -0.280774563244627 1104 6 -0.11282606395067063 1104 7 -0.2652376971056185 1104 8 -0.023514169912623117 1104 9 -0.14690711896486164 1104 10 0.1709799591552823 1104 11 -0.14169444461093406 1104 12 -0.049052146092797955 1107 1 -0.08957767727462951 1107 2 -0.07076575588747858 1107 3 -0.013183739128145078 1107 4 -0.11702525185692636 1107 5 -0.08065621375799736 1107 6 0.009499583144773283 1107 7 -0.11295266096492895 1107 8 0.05819227976878949 1107 9 -0.12846574065839178 1107 10 0.22867979962995122 1107 11 0.05904546725111004 1107 12 -0.06297770914751766 1106 1 0.15391118070517606 1106 2 0.0922948910285939 1106 3 0.10236374534481385 1106 4 0.0744296415697363 1106 5 -0.037808536553264105 1106 6 -0.062437018248992615 1106 7 -0.1321699477679843 1106 8 0.02101282002657001 1106 9 -0.1204614076489321 1106 10 -0.025515550022348066 1106 11 0.07401165619815941 1106 12 0.017495389705160846 2103 1 0.47572542042028587 2103 2 0.48106812404268595 2103 3 0.3519246824900506 2103 4 0.4214948736198849 2103 5 0.44049954118273504 2103 6 0.31368647121961857 2103 7 0.19699801663801253 2103 8 0.3048536247931324 2103 9 0.46550337085518123 2103 10 0.17341488221443768 2103 11 0.32133383476320887 2103 12 0.24929032782880256 2102 1 -0.27874356557114766 2102 2 -0.18897913411924705 2102 3 -0.11343884411064664 2102 4 -0.04435897403390143 2102 5 -0.19249947903531606 2102 6 -0.12987419577011394 2102 7 -0.2943928392008175 2102 8 -0.30875822958934407 2102 9 -0.10056333378005178 2102 10 -0.2677701893856437 2102 11 -0.09877416360664171 2102 12 -0.588583616084648 2101 1 0.12373728527612826 2101 2 0.23814102875511622 2101 3 0.3463563430848957 2101 4 0.09513452752550222 2101 5 0.3057838349286257 2101 6 0.3315082245689993 2101 7 0.29865981287418464 2101 8 0.18921130859911273 2101 9 0.4190187646227912 2101 10 0.1675679516339983 2101 11 0.14259773799679465 2101 12 -0.261374393776471 2107 1 -0.15356332884859114 2107 2 -0.1358110273963291 2107 3 -0.12692982468676917 2107 4 -0.17682291561917296 2107 5 -0.07469445323937407 2107 6 -0.21954287279746154 2107 7 -0.03342424681169831 2107 8 -0.12926030965038393 2107 9 0.0040643073269706065 2107 10 -0.47122478544995516 2107 11 -0.236270939478608 2107 12 -0.4599104259063971 2106 1 -0.5030558272895043 2106 2 -0.3753588262195464 2106 3 -0.42470712923762477 2106 4 -0.4237007615877104 2106 5 -0.4186452495225197 2106 6 -0.5671602119725847 2106 7 -0.2136026682925234 2106 8 -0.28442957875895303 2106 9 -0.3151567435220457 2106 10 -0.5373803434168707 2106 11 -0.4422742040846117 2106 12 -0.8256637280823398 2105 1 -0.08713778485128643 2105 2 -0.09939066136996644 2105 3 -0.3337185234053237 2105 4 -0.3584178947681984 2105 5 -0.2337194873561259 2105 6 -0.4752270534527909 2105 7 -0.13173693494029948 2105 8 -0.2891623452654599 2105 9 -0.20530165056786132 2105 10 -0.6825136039703068 2105 11 -0.3797329864654273 2105 12 -0.2768494382482416 2104 1 0.2930279986700306 2104 2 0.23076784703312825 2104 3 0.3442828715744426 2104 4 0.2506756314466756 2104 5 0.011012100909933764 2104 6 0.10295627150065911 2104 7 0.02659766788506346 2104 8 0.05885514414846682 2104 9 0.05137956088572082 2104 10 -0.371430054253608 2104 11 -0.1604362221318425 2104 12 0.005817574017505933 2111 1 -0.5114974439922548 2111 2 -0.6955196682454314 2111 3 -0.5675110705363338 2111 4 -0.6349218122921343 2111 5 -0.3867045253354391 2111 6 -0.6548062754833168 2111 7 -0.5980897296037853 2111 8 -0.7526783695976995 2111 9 -0.6325015779879308 2111 10 -0.5340323692950619 2111 11 -0.7324121338081575 2111 12 -0.6711567477070552 2110 1 -0.027061314221768384 2110 2 0.049540431924221195 2110 3 -0.019776164286408715 2110 4 0.07348633292927786 2110 5 -0.11368612353928143 2110 6 -0.09401030503472896 2110 7 -0.13632762710193447 2110 8 -0.17207796199465264 2110 9 -0.16324708294055768 2110 10 0.012140021158657532 2110 11 -0.004980728204181162 2110 12 -0.08955010049986356 2109 1 -0.684350162520353 2109 2 -1.0484660332948685 2109 3 -0.8244368050637974 2109 4 -1.1035707714553986 2109 5 -0.8237590806885926 2109 6 -0.7772398732339809 2109 7 -1.0297631920872483 2109 8 -0.7390148794452962 2109 9 -1.1287982120152478 2109 10 -1.0062098108317272 2109 11 -0.841125958255045 2109 12 -0.8911468045161506 2108 1 -0.491318116355302 2108 2 -0.5949397476353333 2108 3 -0.9947806248938882 2108 4 -0.6173321350677199 2108 5 -0.7449178192864458 2108 6 -0.8573806646011306 2108 7 -0.6732482880997068 2108 8 -0.6242207657186469 2108 9 -1.0064967391623298 2108 10 -0.8855028828403881 2108 11 -0.3393836127589154 2108 12 -0.6006034729469718 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 31.0 15 1946.0 16 50643.0 17 134382.0 18 234544.0 19 312468.0 20 307884.0 21 362208.0 22 362279.0 23 313478.0 24 304269.0 25 298563.0 26 282043.0 27 279950.0 28 301640.0 29 322614.0 30 388295.0 31 483167.0 32 726066.0 33 1594519.0 34 4069031.0 35 4587904.0 36 581344.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 11.978967399026754 45.50303731431375 31.53660029395185 10.981394992707648 2 32.21714619331371 32.74849520849648 23.422076377908503 11.612282220281303 3 17.466986861005047 14.58785756513728 27.692329496023994 40.25282607783368 4 36.13437732295708 19.046205019759167 22.09489407745182 22.724523579831928 5 34.7396112966307 28.242380470238327 13.522687860748583 23.495320372382388 6 22.80110370600692 51.946756136533246 19.482058948904946 5.770081208554887 7 22.12271877011402 10.721635518946956 29.337619906465733 37.818025804473294 8 13.459475603444277 33.248799884755556 25.265711319060465 28.026013192739697 9 9.978233378333309 31.594731738873183 33.652296532580486 24.774738350213028 10 26.01544437455719 32.266399938942044 6.9609015570515185 34.75725412944925 11 32.0687775671889 19.959160129154267 1.1224000979675897 46.849662205689235 12 19.64084522077924 27.498173537609173 25.438314162329252 27.42266707928233 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 310.0 1 310.0 2 310.0 3 310.0 4 999.0 5 1688.0 6 1688.0 7 1688.0 8 1688.0 9 1688.0 10 1688.0 11 1688.0 12 1688.0 13 5447.0 14 9206.0 15 9206.0 16 9206.0 17 9206.0 18 9206.0 19 9206.0 20 9206.0 21 26207.5 22 43209.0 23 43209.0 24 43209.0 25 43209.0 26 43209.0 27 43209.0 28 43209.0 29 136930.5 30 230652.0 31 230652.0 32 230652.0 33 230652.0 34 230652.0 35 230652.0 36 230652.0 37 230652.0 38 3010817.5 39 5790983.0 40 5790983.0 41 5790983.0 42 5790983.0 43 5790983.0 44 5790983.0 45 5790983.0 46 5553364.5 47 5315746.0 48 5315746.0 49 5315746.0 50 5315746.0 51 5315746.0 52 5315746.0 53 5315746.0 54 4951964.0 55 4588182.0 56 4588182.0 57 4588182.0 58 4588182.0 59 4588182.0 60 4588182.0 61 4588182.0 62 4588182.0 63 2421094.5 64 254007.0 65 254007.0 66 254007.0 67 254007.0 68 254007.0 69 254007.0 70 254007.0 71 153992.5 72 53978.0 73 53978.0 74 53978.0 75 53978.0 76 53978.0 77 53978.0 78 53978.0 79 31701.0 80 9424.0 81 9424.0 82 9424.0 83 9424.0 84 9424.0 85 9424.0 86 9424.0 87 9424.0 88 5389.5 89 1355.0 90 1355.0 91 1355.0 92 1355.0 93 1355.0 94 1355.0 95 1355.0 96 941.5 97 528.0 98 528.0 99 528.0 100 528.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 6.135244846578386E-6 6 0.0 7 6.135244846578386E-6 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 12 1.6299268E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 2.3563061281461897 #Duplication Level Percentage of deduplicated Percentage of total 1 68.11791275711981 1.6050665526612895 2 12.252448985455148 0.5774104125845306 3 4.835646219447953 0.341827884612965 4 2.6388887092708555 0.24872118548602828 5 1.8409786743545737 0.21689546660840653 6 1.484667423847926 0.20989985694431307 7 0.965408480286336 0.15923585427840956 8 0.9399685269899007 0.177188288032868 9 0.6413546828172616 0.1360105172493812 >10 5.023091976160187 2.3711346291087874 >50 0.6378331802684734 1.0428332532854556 >100 0.4652136831827149 2.1435266868428395 >500 0.07669165230009714 1.2804094777778259 >1k 0.07159806481426484 3.1141957336381623 >5k 0.0025928074013745355 0.3927458626846966 >10k+ 0.005704176283023899 85.98289833820407 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TGAGAACCTCCA 1432761 8.790339541628494 No Hit AGCAGTCGCGAT 1095557 6.721510438382877 No Hit AATCAGTCTCGT 997269 6.1184894929023805 No Hit TTCAGACTACCA 956183 5.866416823135861 No Hit GAGTGAGTACAA 883774 5.422169879039966 No Hit ATTTCGACATGC 860297 5.278132735776846 No Hit TGCCCATTTAAG 838741 5.145881397864002 No Hit GCGGATGTGACT 791674 4.857113828670098 No Hit CAGGGTGATACC 785288 4.817934155079848 No Hit ATCGAATGCGGC 767667 4.70982500563829 No Hit AATCCGTACAGC 766889 4.705051785147652 No Hit AACGGATAAACG 724231 4.443334510482312 No Hit AGTTCAGACGCT 700095 4.295254240865296 No Hit ACCGTGCATAGG 656196 4.025923127345351 No Hit CTTATCAAGGCG 609279 3.738075844878433 No Hit TAATGACCACGC 565642 3.470352165508291 No Hit TGCCTACAAGCA 551353 3.382685651895533 No Hit TGAAAACCTCCA 27957 0.17152304017579192 No Hit TGAGAACCTCAA 20722 0.12713454371079733 No Hit AGCAGTCGCGCT 18330 0.11245903803778182 No Hit >>END_MODULE >>Adapter Content warn >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACAG 225 0.0 6.0000005 5 GAAATCG 55 0.009160763 6.0000005 2 GGGTGCT 275 0.0 6.0000005 3 GACAGAG 55 0.009160763 6.0000005 1 GTCGCAT 55 0.009160763 6.0000005 5 GTCGCAC 55 0.009160763 6.0000005 5 GTCGAGC 55 0.009160763 6.0000005 5 AGCCCTC 55 0.009160763 6.0000005 1 TAGAATG 225 0.0 6.0000005 2 CATGACC 110 1.8153878E-7 6.0000005 2 TAGAAGC 55 0.009160763 6.0000005 5 GATCCTA 55 0.009160763 6.0000005 4 GGCAAAG 110 1.8153878E-7 6.0000005 5 CCTACGA 55 0.009160763 6.0000005 3 CGATTGC 345 0.0 6.0000005 3 GACCCCA 55 0.009160763 6.0000005 5 GACTTGC 275 0.0 6.0000005 6 AACGGAC 440 0.0 6.0000005 1 GGAAGAT 55 0.009160763 6.0000005 3 GCACAGC 1010 0.0 6.0000005 6 >>END_MODULE